Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC098826.1-201ENST00000433943 471 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC073063.1-201ENST00000434352 607 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 MTND2P4-201ENST00000445034 1004 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 MTCO1P27-201ENST00000448269 226 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 PAXBP1P1-201ENST00000449315 447 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 RPS27AP8-201ENST00000452665 445 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 snoU109.4-201ENST00000458953 143 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC106707.2-201ENST00000484182 374 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC109486.1-201ENST00000486833 374 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 DSTNP2-201ENST00000504533 515 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 MTND5P4-201ENST00000514978 288 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 RNU6-826P-201ENST00000516827 104 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC012435.1-202ENST00000568772 240 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC011260.1-201ENST00000578420 472 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 MIR2682-201ENST00000580305 110 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AL669831.4-202ENST00000590817 238 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC112187.2-201ENST00000604345 283 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC073657.2-201ENST00000605661 303 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC090186.1-201ENST00000605991 572 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC080013.6-201ENST00000606185 215 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 uc_338.25-201ENST00000613756 156 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC083809.1-201ENST00000615051 472 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC009090.3-201ENST00000616553 565 ntBASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
CCDC28BQ9BUN5 AC092435.3-201ENST00000565538 3654 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL359837.1-201ENST00000381357 287 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 SNORD116-9-201ENST00000384000 95 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 SNORD116-3-201ENST00000384287 95 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 SNORD116-7-201ENST00000384404 95 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 SNORD116-5-201ENST00000384462 95 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 RNU6-821P-201ENST00000390995 107 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 MIR1305-201ENST00000408300 86 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 MIR320C1-201ENST00000408566 88 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 HSPE1P1-201ENST00000421494 318 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL590233.1-201ENST00000430017 456 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 MTND1P30-201ENST00000441241 901 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 RPL21P23-201ENST00000446654 460 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC005297.2-201ENST00000450430 606 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 ELL2P3-201ENST00000457883 1602 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 RPL31P3-201ENST00000458430 332 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 snoU13.3-201ENST00000459441 104 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AP001992.1-205ENST00000462248 379 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 RPL7P23-201ENST00000493874 747 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC106872.3-201ENST00000495104 446 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC006499.5-201ENST00000505037 514 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 ARL4AP2-201ENST00000507378 601 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC098799.2-201ENST00000509466 868 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC093677.1-201ENST00000514414 678 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 RNU1-95P-201ENST00000516357 160 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 RNU1-128P-201ENST00000516704 160 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 OR6C7P-201ENST00000547875 934 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC084824.1-201ENST00000550917 1005 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 HIGD1AP1-201ENST00000550979 275 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 PCMTD1P2-201ENST00000565017 355 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC107954.1-201ENST00000565906 727 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 MIR4276-201ENST00000584832 70 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL353997.4-201ENST00000586196 166 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL031985.2-201ENST00000600955 480 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AF131215.7-201ENST00000602443 707 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 IGHV3-29-201ENST00000604817 344 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC092354.1-201ENST00000606057 376 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL359198.2-201ENST00000611836 194 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AL596245.1-201ENST00000618994 362 ntBASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC28BQ9BUN5 AC243312.2-201ENST00000623340 601 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms