Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 TPRKBP2-201ENST00000565969 475 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 COX6CP3-201ENST00000580869 223 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AP000860.1-201ENST00000605250 559 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC007038.2-201ENST00000608095 740 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AL590282.1-201ENST00000610379 1136 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC012531.5-201ENST00000611375 151 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AL592295.2-201ENST00000612578 206 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 AC124864.2-201ENST00000624736 186 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 MIR6863-201ENST00000636112 90 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 UBE3AP2-201ENST00000429033 2259 ntBASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.4□□□□□ -1.71
CDK5RAP3Q96JB5 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC004925.1-201ENST00000624256 2706 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AL138878.1-201ENST00000405131 347 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 EIF1P1-201ENST00000421436 341 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC007283.2-201ENST00000424739 197 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 MTND3P21-201ENST00000433774 331 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 VDAC1P3-201ENST00000434069 851 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 OR4C10P-201ENST00000434991 931 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 UBDP1-202ENST00000457888 382 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 snoU13.24-201ENST00000458998 104 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC010493.1-201ENST00000513479 292 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 RNU6-1095P-201ENST00000516148 108 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC124947.2-202ENST00000552735 133 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 OR4T1P-201ENST00000554933 911 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC087481.2-201ENST00000565492 330 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC136624.4-201ENST00000573044 370 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 KC877982.1-201ENST00000602313 470 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AL606490.9-201ENST00000603331 271 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC006254.3-201ENST00000603353 884 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC004908.2-201ENST00000609090 574 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 CR381653.2-201ENST00000624041 768 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AC048347.1-201ENST00000624621 427 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 AL138713.1-201ENST00000624026 2130 ntBASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CDK5RAP3Q96JB5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AL365440.1-201ENST00000436135 2167 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 BDP1P-201ENST00000582658 1990 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 OR5J1P-201ENST00000313544 939 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 MIR372-201ENST00000362225 67 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 RNU4-1-201ENST00000363925 141 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 RNU5A-8P-201ENST00000364102 114 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 RPL17P50-201ENST00000396131 546 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 HSPE1P26-201ENST00000405341 275 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 RNA5SP39-201ENST00000411245 120 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 MTND3P17-201ENST00000416968 344 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AL159169.1-201ENST00000421119 127 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 BEND7P1-201ENST00000422058 457 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 ISCA1P1-201ENST00000426679 387 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC017083.1-201ENST00000428093 483 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC133104.1-201ENST00000429100 218 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AL136380.1-201ENST00000447970 162 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 PSPHP1-201ENST00000450062 261 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC007967.1-201ENST00000455422 1159 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC004924.1-201ENST00000480160 781 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 RPS26P15-201ENST00000488067 348 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 FTH1P21-201ENST00000512179 511 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC103783.1-201ENST00000520506 373 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC087369.1-201ENST00000520775 996 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 ZNF519P2-201ENST00000557032 169 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AL845331.3-202ENST00000562856 261 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AP001429.1-201ENST00000602568 530 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 U4.5-201ENST00000617137 123 ntBASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC4.38□□□□□ -1.71
CDK5RAP3Q96JB5 AL157786.1-207ENST00000627771 695 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms