Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.72□□□□□ -1.65
ERCC4Q92889 OR5B19P-201ENST00000531766 928 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.72□□□□□ -1.65
ERCC4Q92889 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.72□□□□□ -1.65
ERCC4Q92889 AC123904.3-201ENST00000547218 814 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AL138976.2-201ENST00000563989 694 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC015917.1-201ENST00000579654 510 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.72□□□□□ -1.65
ERCC4Q92889 YWHAQP7-201ENST00000603536 658 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC010680.4-201ENST00000605334 543 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC103710.2-201ENST00000609912 942 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AL121757.2-201ENST00000611223 313 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 DISC2.1-201ENST00000612827 205 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC009233.1-201ENST00000616477 371 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.72□□□□□ -1.65
ERCC4Q92889 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.72□□□□□ -1.65
ERCC4Q92889 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
ERCC4Q92889 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.72□□□□□ -1.65
ERCC4Q92889 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
ERCC4Q92889 AC106871.1-201ENST00000568324 3102 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 ZNF734P-201ENST00000419494 1534 ntBASIC4.72□□□□□ -1.65
ERCC4Q92889 AC018555.1-201ENST00000567548 1980 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC4Q92889 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC4Q92889 Y_RNA.157-201ENST00000363638 102 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 SNORD51-201ENST00000384320 80 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 RN7SKP177-201ENST00000410567 355 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC016397.1-201ENST00000412463 242 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC4Q92889 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.71□□□□□ -1.66
ERCC4Q92889 MTND1P14-201ENST00000427400 950 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC4Q92889 PHBP16-201ENST00000446318 950 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AC009220.1-201ENST00000451614 275 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC4Q92889 MTND1P9-201ENST00000453775 944 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 SNRPGP5-201ENST00000456003 220 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AF213884.1-201ENST00000488102 463 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC4Q92889 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC4Q92889 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 HSPD1P15-201ENST00000505573 1122 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC010486.1-201ENST00000511793 424 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.71□□□□□ -1.66
ERCC4Q92889 SNORD27.1-201ENST00000516319 72 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 RNU6-410P-201ENST00000517006 107 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.71□□□□□ -1.66
ERCC4Q92889 OR5BN1P-201ENST00000532955 829 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AC107016.1-201ENST00000550463 337 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AC098848.2-201ENST00000588023 330 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC018638.8-201ENST00000588755 281 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC4Q92889 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC4Q92889 AC245517.5-201ENST00000611529 162 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC010133.1-201ENST00000615809 842 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC099669.2-201ENST00000616549 437 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AL136221.1-201ENST00000621449 509 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AP003400.5-201ENST00000624827 617 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 AC091925.2-201ENST00000625059 256 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.71□□□□□ -1.66
ERCC4Q92889 LINC02471-203ENST00000641941 4752 ntBASIC4.71□□□□□ -1.66
ERCC4Q92889 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
ERCC4Q92889 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC4Q92889 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.71□□□□□ -1.66
ERCC4Q92889 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
ERCC4Q92889 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
ERCC4Q92889 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ERCC4Q92889 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.7□□□□□ -1.66
ERCC4Q92889 AC027287.1-201ENST00000553115 1453 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
ERCC4Q92889 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
ERCC4Q92889 RPL7P26-201ENST00000333817 754 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
ERCC4Q92889 RNU6-339P-201ENST00000384310 107 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 Y_RNA.535-201ENST00000384612 99 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 RNU6-606P-201ENST00000384721 111 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 MIR141-201ENST00000384975 95 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
ERCC4Q92889 AL138878.1-201ENST00000405131 347 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 RNU2-9P-201ENST00000410194 145 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 RNU6-1068P-201ENST00000410958 103 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.7□□□□□ -1.66
ERCC4Q92889 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.7□□□□□ -1.66
ERCC4Q92889 RPL36AP53-201ENST00000432891 316 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.7□□□□□ -1.66
ERCC4Q92889 RAC1P7-201ENST00000445367 377 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 Z95327.1-201ENST00000446082 482 ntBASIC4.7□□□□□ -1.66
ERCC4Q92889 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms