Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 SNORA24.1-201ENST00000384401 135 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.518-201ENST00000384552 113 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 MIR298-201ENST00000401212 88 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 U3.32-201ENST00000408116 212 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 GSTM3P2-201ENST00000412746 530 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC011933.1-201ENST00000413334 321 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 TBCAP2-201ENST00000416175 326 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 BX510359.2-201ENST00000417920 305 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 RPL7P37-201ENST00000425095 738 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 RPL36AP6-201ENST00000435770 321 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC099799.1-201ENST00000439809 192 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC011816.1-201ENST00000441346 546 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 FTH1P25-201ENST00000447665 469 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 BTF3P6-201ENST00000448054 499 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 RPS15AP27-201ENST00000449183 343 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AL691482.1-201ENST00000453255 87 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC010326.1-201ENST00000462726 602 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC026784.1-201ENST00000507986 352 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 SNORA81.3-201ENST00000517283 198 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 COX6CP3-201ENST00000580869 223 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 MIR5692C1-201ENST00000585309 91 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 RPL23AP92-201ENST00000603609 255 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AL031176.1-201ENST00000604554 466 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 MTND4LP5-201ENST00000605152 292 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AL049794.2-201ENST00000616301 365 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AL596245.1-201ENST00000618994 362 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 MIR6853-201ENST00000619642 74 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 AC000123.2-201ENST00000623124 461 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 CR381572.2-201ENST00000624852 397 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 BDP1P-201ENST00000582658 1990 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 MAPK10-263ENST00000641052 4307 ntBASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SHKBP1Q8TBC3 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC093775.1-201ENST00000624154 1868 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.150-201ENST00000363562 102 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.214-201ENST00000364201 112 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 SNORD14.1-201ENST00000365609 90 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-128P-201ENST00000383976 107 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 Y_RNA.478-201ENST00000384358 107 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 RNU6-1127P-201ENST00000384580 107 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 U3.30-201ENST00000391308 210 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AL357515.1-201ENST00000402967 542 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AL583834.1-201ENST00000406943 343 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 BX682237.1-201ENST00000415016 335 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC114491.1-201ENST00000416095 246 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC104333.2-201ENST00000422630 192 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC068287.1-201ENST00000430283 295 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC016712.1-201ENST00000431088 378 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 RAC1P7-201ENST00000445367 377 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC000111.2-201ENST00000448200 210 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC005229.2-201ENST00000456995 399 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 SNORD5.1-201ENST00000458800 75 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 RPS17P2-201ENST00000461663 408 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC104472.2-201ENST00000469035 601 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC104806.1-201ENST00000508720 308 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 RN7SKP96-201ENST00000516948 297 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 HSPE1P20-201ENST00000538133 289 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 DYNLL1P4-201ENST00000549314 266 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC090615.1-201ENST00000577519 154 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 RN7SL690P-201ENST00000582087 240 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 MIR3936-201ENST00000584304 110 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC011494.1-201ENST00000596454 237 ntBASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.11□□□□□ -1.59
SHKBP1Q8TBC3 AC055839.1-201ENST00000634467 498 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms