Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC079791.1-201ENST00000605356 973 ntBASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 AC068722.2-201ENST00000618734 544 ntBASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 AC092608.2-201ENST00000624427 218 ntBASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SPTSSBQ8NFR3 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 OR4G2P-202ENST00000641004 1759 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 SNORA23-201ENST00000365128 182 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 MIR27B-201ENST00000385129 97 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 MIR1290-201ENST00000408735 78 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 RNU6-955P-201ENST00000410497 104 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 UBE2V1P9-201ENST00000414760 368 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 Z85995.1-201ENST00000415547 335 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC245052.5-201ENST00000416320 649 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC012497.1-201ENST00000429392 575 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 HMGB1P9-201ENST00000429856 646 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC068135.1-201ENST00000446164 246 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 RPL21P134-201ENST00000453468 483 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 OR2AF1P-201ENST00000454899 889 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AL049714.1-201ENST00000466686 347 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC107032.1-201ENST00000485945 480 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC026427.2-201ENST00000506228 536 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC112518.2-201ENST00000508565 425 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC026436.1-201ENST00000510537 270 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AL359273.1-201ENST00000510918 627 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC022447.1-201ENST00000515358 464 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC011611.5-201ENST00000552477 578 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 MIR3200-201ENST00000580767 85 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC010928.2-201ENST00000588017 287 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC009303.3-201ENST00000591103 736 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC097504.2-201ENST00000608088 454 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AL159169.3-201ENST00000608871 561 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AC090132.2-201ENST00000615881 347 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AL109659.3-201ENST00000624985 950 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 MIR1291-201ENST00000627649 87 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 MTND5P31-201ENST00000419366 1374 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 ZNF702P-202ENST00000434269 1966 ntBASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
SPTSSBQ8NFR3 AK9-203ENST00000368948 2478 ntTSL 5 BASIC1.15□□□□□ -2.22
SPTSSBQ8NFR3 RNA5SP160-201ENST00000364866 120 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 SNORA67.4-201ENST00000384688 142 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 RNU6-882P-201ENST00000391025 103 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 U3.26-201ENST00000391236 204 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 EEF1A1P41-201ENST00000414667 207 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC005005.2-201ENST00000420779 380 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 HMGN2P31-201ENST00000432430 273 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 Z80107.1-201ENST00000436830 412 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 Z75741.1-201ENST00000446793 314 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 RPS29P33-201ENST00000456717 146 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC080013.2-201ENST00000460866 323 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 PABPC1P3-201ENST00000469174 459 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 RPL7P49-201ENST00000471402 708 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC025181.1-201ENST00000477507 416 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 OR4V1P-201ENST00000525394 1140 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 HSBP1P1-201ENST00000555205 166 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AL133241.1-201ENST00000556832 487 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 DEFB122-202ENST00000569013 197 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 LRRC37A5P-203ENST00000580181 585 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC105224.1-201ENST00000587055 421 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AC008121.1-201ENST00000603244 268 ntBASIC1.15□□□□□ -2.23
SPTSSBQ8NFR3 AL137246.1-201ENST00000607072 977 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms