Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 RPL21P24-201ENST00000413752 448 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4□□□□□ -1.77
CCDC38Q502W7 ELOCP17-201ENST00000414751 326 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC006366.1-201ENST00000422002 759 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC018630.2-202ENST00000422992 927 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4□□□□□ -1.77
CCDC38Q502W7 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4□□□□□ -1.77
CCDC38Q502W7 AC008850.1-201ENST00000427546 362 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC005094.1-201ENST00000440420 368 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4□□□□□ -1.77
CCDC38Q502W7 MTND1P27-201ENST00000451117 902 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 MTND1P12-201ENST00000455231 147 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC4□□□□□ -1.77
CCDC38Q502W7 AC008481.1-201ENST00000463278 396 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AL132838.2-201ENST00000492041 314 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 ARL2BPP4-201ENST00000506854 471 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 CDC42P4-201ENST00000510507 563 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 GMPSP1-201ENST00000514075 579 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 Y_RNA.672-201ENST00000516289 104 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC4□□□□□ -1.77
CCDC38Q502W7 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4□□□□□ -1.77
CCDC38Q502W7 AC100870.1-201ENST00000522035 505 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 HSPE1P5-201ENST00000561489 272 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4□□□□□ -1.77
CCDC38Q502W7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4□□□□□ -1.77
CCDC38Q502W7 MIR3682-201ENST00000581338 84 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4□□□□□ -1.77
CCDC38Q502W7 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4□□□□□ -1.77
CCDC38Q502W7 AL606834.2-201ENST00000602954 668 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC008277.2-201ENST00000605196 797 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC064807.4-201ENST00000607201 407 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 MIR6867-201ENST00000610636 67 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AC010678.1-201ENST00000614118 713 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 AL110115.1-201ENST00000614396 364 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC4□□□□□ -1.77
CCDC38Q502W7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCDC38Q502W7 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4□□□□□ -1.77
CCDC38Q502W7 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4□□□□□ -1.77
CCDC38Q502W7 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC38Q502W7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 RNY4P16-201ENST00000364768 94 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RNA5SP479-201ENST00000364858 117 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 U1.1-201ENST00000384101 164 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RNU6-297P-201ENST00000384636 107 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC38Q502W7 AL590704.1-201ENST00000402856 794 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RNU2-8P-201ENST00000410727 190 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RNA5SP107-201ENST00000411358 122 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 YPEL5P1-201ENST00000419731 367 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC004975.1-201ENST00000428733 208 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AL353706.1-201ENST00000436728 494 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 SNORA71B-202ENST00000439232 272 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC093156.1-201ENST00000440382 670 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AL022238.1-201ENST00000442557 355 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RANP8-201ENST00000444720 713 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 MTND1P3-201ENST00000484956 952 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 MTCO1P35-201ENST00000515270 228 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RN7SKP13-201ENST00000515933 244 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RNU6-64P-201ENST00000517119 105 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 FAM60DP-201ENST00000524174 632 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC123904.3-201ENST00000547218 814 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC091516.1-201ENST00000549191 703 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 RPL23AP84-201ENST00000571193 464 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 ZNF415P1-201ENST00000582279 1166 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 AL591034.3-201ENST00000605511 685 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 RMST_8.1-201ENST00000610287 165 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC013476.2-201ENST00000614456 459 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 AC068724.3-201ENST00000625906 87 ntBASIC3.99□□□□□ -1.77
CCDC38Q502W7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC38Q502W7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms