Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.51□□□□□ -2.01
CXCL12P48061 SULT1C2P1-202ENST00000562418 459 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AC083760.1-201ENST00000589621 670 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AL606834.3-201ENST00000602615 496 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC2.51□□□□□ -2.01
CXCL12P48061 AL390240.1-201ENST00000612950 384 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AC008083.4-201ENST00000615076 444 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AC009318.4-201ENST00000620496 486 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 AL157770.1-201ENST00000623049 439 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.51□□□□□ -2.01
CXCL12P48061 AC026634.1-201ENST00000634369 198 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 MTND2P41-201ENST00000637599 773 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 MFSD8-245ENST00000641743 948 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL12P48061 AC004972.1-201ENST00000623934 2209 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
CXCL12P48061 AC008264.2-201ENST00000610193 3731 ntBASIC2.51□□□□□ -2.01
CXCL12P48061 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
CXCL12P48061 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL12P48061 RPL21P132-201ENST00000331267 462 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 RNU1-91P-201ENST00000364746 163 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 U8.9-201ENST00000365667 134 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 SNORA51.6-201ENST00000384151 125 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 SNORD65.1-201ENST00000390889 71 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 Y_RNA.578-201ENST00000390903 88 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 RNU6-1300P-201ENST00000391046 108 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 RNU6-837P-201ENST00000391056 108 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 RPL21P3-201ENST00000395517 478 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC016769.3-201ENST00000396562 315 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 MTCO1P56-201ENST00000401674 224 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.5□□□□□ -2.01
CXCL12P48061 AC107081.1-201ENST00000414975 361 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL12P48061 AC006548.1-201ENST00000427470 102 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC093151.1-201ENST00000427711 313 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL12P48061 SEPT7P5-201ENST00000434048 306 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL12P48061 AC079776.3-201ENST00000450665 370 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 AC146507.2-201ENST00000460608 476 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 RPL21P99-201ENST00000480369 423 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AP004217.1-201ENST00000480579 346 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC013828.1-201ENST00000481845 158 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 BOLA3P3-201ENST00000505182 232 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL12P48061 MTCO2P32-201ENST00000514865 403 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC021269.2-201ENST00000532318 330 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL12P48061 YWHAZP1-201ENST00000556286 722 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.5□□□□□ -2.01
CXCL12P48061 XIAPP1-201ENST00000603162 600 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC018645.2-201ENST00000609151 472 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC006329.2-201ENST00000611491 394 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 AC010872.1-201ENST00000624225 675 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 CR381572.1-201ENST00000625098 102 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 ZNF663P-202ENST00000641770 1131 ntBASIC2.5□□□□□ -2.01
CXCL12P48061 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.5□□□□□ -2.01
CXCL12P48061 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.5□□□□□ -2.01
CXCL12P48061 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CXCL12P48061 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL12P48061 MIR148B-201ENST00000362252 99 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 SUGT1P1-201ENST00000379514 476 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
CXCL12P48061 MIR764-201ENST00000390811 85 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CXCL12P48061 AL024474.1-201ENST00000404655 591 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.49□□□□□ -2.01
CXCL12P48061 MTND4P3-201ENST00000417829 541 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.49□□□□□ -2.01
CXCL12P48061 OFD1P12Y-201ENST00000427963 1207 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 SRIP2-201ENST00000428470 166 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 MTCO1P3-201ENST00000429327 192 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 OFD1P13Y-201ENST00000431179 1232 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 HMGN2P3-201ENST00000433603 273 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 HMGN2P5-201ENST00000436882 273 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 YWHAZP7-201ENST00000436906 631 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 ELOCP13-201ENST00000443934 329 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 MTCO1P48-201ENST00000448024 1096 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.49□□□□□ -2.01
CXCL12P48061 AC010285.1-201ENST00000470580 392 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 VPS26AP1-201ENST00000483197 979 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC093767.1-201ENST00000504523 156 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.49□□□□□ -2.01
CXCL12P48061 SNORA31.20-201ENST00000517111 133 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 RNU6-1073P-201ENST00000517182 106 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC2.49□□□□□ -2.01
CXCL12P48061 AC118942.1-201ENST00000529674 1035 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.49□□□□□ -2.01
CXCL12P48061 MTCYBP27-201ENST00000555160 670 ntBASIC2.49□□□□□ -2.01
CXCL12P48061 LARP7P2-201ENST00000575306 125 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms