Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC062016.1-201ENST00000355719 319 ntBASIC2.55□□□□□ -2
RFC3P40938 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.55□□□□□ -2
RFC3P40938 SNORD56.5-201ENST00000364281 72 ntBASIC2.55□□□□□ -2
RFC3P40938 RNU6-707P-201ENST00000364647 95 ntBASIC2.55□□□□□ -2
RFC3P40938 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 RNU2-43P-201ENST00000410306 190 ntBASIC2.55□□□□□ -2
RFC3P40938 HMGN2P30-201ENST00000423237 256 ntBASIC2.55□□□□□ -2
RFC3P40938 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.55□□□□□ -2
RFC3P40938 DPRXP1-201ENST00000426312 460 ntBASIC2.55□□□□□ -2
RFC3P40938 ARL5AP4-201ENST00000430731 512 ntBASIC2.55□□□□□ -2
RFC3P40938 MTND2P5-201ENST00000432656 1006 ntBASIC2.55□□□□□ -2
RFC3P40938 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.55□□□□□ -2
RFC3P40938 AC024082.2-201ENST00000434771 238 ntBASIC2.55□□□□□ -2
RFC3P40938 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.55□□□□□ -2
RFC3P40938 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
RFC3P40938 KC877373.1-201ENST00000479066 408 ntBASIC2.55□□□□□ -2
RFC3P40938 RPL21P131-201ENST00000497298 483 ntBASIC2.55□□□□□ -2
RFC3P40938 AIG1P1-201ENST00000503376 148 ntBASIC2.55□□□□□ -2
RFC3P40938 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 AC034159.1-201ENST00000513885 583 ntBASIC2.55□□□□□ -2
RFC3P40938 MTCO3P27-201ENST00000514397 196 ntBASIC2.55□□□□□ -2
RFC3P40938 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.55□□□□□ -2
RFC3P40938 AC025881.1-201ENST00000518851 512 ntBASIC2.55□□□□□ -2
RFC3P40938 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.55□□□□□ -2
RFC3P40938 AC104417.1-201ENST00000523974 751 ntBASIC2.55□□□□□ -2
RFC3P40938 MTCO3P15-201ENST00000526563 574 ntBASIC2.55□□□□□ -2
RFC3P40938 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.55□□□□□ -2
RFC3P40938 AP000867.2-201ENST00000532468 320 ntBASIC2.55□□□□□ -2
RFC3P40938 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 MIR4513-201ENST00000581077 86 ntBASIC2.55□□□□□ -2
RFC3P40938 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.55□□□□□ -2
RFC3P40938 MIR3609-201ENST00000582661 80 ntBASIC2.55□□□□□ -2
RFC3P40938 AL161431.1-201ENST00000618966 4205 ntBASIC2.55□□□□□ -2
RFC3P40938 AC007275.1-201ENST00000621243 671 ntBASIC2.55□□□□□ -2
RFC3P40938 AC004009.2-201ENST00000623016 728 ntBASIC2.55□□□□□ -2
RFC3P40938 AP003122.5-201ENST00000527668 3766 ntBASIC2.55□□□□□ -2
RFC3P40938 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RFC3P40938 AC096644.4-201ENST00000563417 2912 ntBASIC2.54□□□□□ -2
RFC3P40938 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
RFC3P40938 Y_RNA.25-201ENST00000362528 102 ntBASIC2.54□□□□□ -2
RFC3P40938 MIR196B-201ENST00000384852 84 ntBASIC2.54□□□□□ -2
RFC3P40938 RNU6-1197P-201ENST00000391183 107 ntBASIC2.54□□□□□ -2
RFC3P40938 AL138827.1-201ENST00000402666 306 ntBASIC2.54□□□□□ -2
RFC3P40938 RPL7P27-201ENST00000403775 720 ntBASIC2.54□□□□□ -2
RFC3P40938 AL356131.1-201ENST00000405826 414 ntBASIC2.54□□□□□ -2
RFC3P40938 RNA5SP184-201ENST00000411071 108 ntBASIC2.54□□□□□ -2
RFC3P40938 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.54□□□□□ -2
RFC3P40938 NUP35P1-201ENST00000422734 947 ntBASIC2.54□□□□□ -2
RFC3P40938 AC019178.2-201ENST00000423595 505 ntBASIC2.54□□□□□ -2
RFC3P40938 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.54□□□□□ -2
RFC3P40938 SEPT7P5-201ENST00000434048 306 ntBASIC2.54□□□□□ -2
RFC3P40938 AC093155.1-201ENST00000440164 826 ntBASIC2.54□□□□□ -2
RFC3P40938 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.54□□□□□ -2
RFC3P40938 SNRPGP6-201ENST00000451124 220 ntBASIC2.54□□□□□ -2
RFC3P40938 AL353691.1-201ENST00000451332 387 ntBASIC2.54□□□□□ -2
RFC3P40938 AL109933.2-201ENST00000452651 260 ntBASIC2.54□□□□□ -2
RFC3P40938 AC010099.1-201ENST00000455434 375 ntBASIC2.54□□□□□ -2
RFC3P40938 AC026410.2-201ENST00000460281 156 ntBASIC2.54□□□□□ -2
RFC3P40938 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.54□□□□□ -2
RFC3P40938 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFC3P40938 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.54□□□□□ -2
RFC3P40938 AL359273.1-201ENST00000510918 627 ntBASIC2.54□□□□□ -2
RFC3P40938 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.54□□□□□ -2
RFC3P40938 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.54□□□□□ -2
RFC3P40938 CASP1P1-201ENST00000526345 212 ntBASIC2.54□□□□□ -2
RFC3P40938 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.54□□□□□ -2
RFC3P40938 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.54□□□□□ -2
RFC3P40938 NBEAP1-201ENST00000554452 979 ntBASIC2.54□□□□□ -2
RFC3P40938 AADACP1-206ENST00000561502 1193 ntBASIC2.54□□□□□ -2
RFC3P40938 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.54□□□□□ -2
RFC3P40938 AC138915.2-201ENST00000569776 97 ntBASIC2.54□□□□□ -2
RFC3P40938 AC105224.1-201ENST00000587055 421 ntBASIC2.54□□□□□ -2
RFC3P40938 TUG1_1.1-201ENST00000610654 145 ntBASIC2.54□□□□□ -2
RFC3P40938 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RFC3P40938 AC011330.2-201ENST00000621680 635 ntBASIC2.54□□□□□ -2
RFC3P40938 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC2.54□□□□□ -2
RFC3P40938 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RFC3P40938 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.54□□□□□ -2
RFC3P40938 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RFC3P40938 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.54□□□□□ -2
RFC3P40938 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RFC3P40938 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.53□□□□□ -2
RFC3P40938 Z99496.1-201ENST00000469424 1477 ntBASIC2.53□□□□□ -2
RFC3P40938 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
RFC3P40938 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.53□□□□□ -2
RFC3P40938 RNU1-35P-201ENST00000362782 153 ntBASIC2.53□□□□□ -2
RFC3P40938 RNA5SP139-201ENST00000364340 117 ntBASIC2.53□□□□□ -2
RFC3P40938 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
RFC3P40938 SNORD65.1-201ENST00000390889 71 ntBASIC2.53□□□□□ -2
RFC3P40938 AL079342.2-201ENST00000403367 482 ntBASIC2.53□□□□□ -2
RFC3P40938 BTF3P8-201ENST00000414577 526 ntBASIC2.53□□□□□ -2
RFC3P40938 RPS7P9-201ENST00000414704 586 ntBASIC2.53□□□□□ -2
RFC3P40938 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.53□□□□□ -2
RFC3P40938 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms