Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
GRIK1P39086 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIK1P39086 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIK1P39086 SAGE2P-201ENST00000420011 2126 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.23□□□□□ -1.57
GRIK1P39086 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIK1P39086 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIK1P39086 AP000542.2-201ENST00000623199 6179 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 RNU6-490P-201ENST00000362985 107 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 RNY3P13-201ENST00000365542 102 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 Y_RNA.376-201ENST00000365638 108 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIK1P39086 MIR558-201ENST00000384920 94 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 AL360182.1-201ENST00000397433 468 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 ATG3P1-201ENST00000419507 911 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 CHIAP3-201ENST00000423668 1133 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 RPL23AP74-201ENST00000437246 471 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 AC104332.1-201ENST00000440471 797 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIK1P39086 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 AC005297.2-201ENST00000450430 606 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 AL691482.1-201ENST00000453255 87 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 SNRPFP3-201ENST00000457792 225 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 HMGB3P30-201ENST00000457863 606 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 AC022493.2-201ENST00000506122 481 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 RNU6-182P-201ENST00000516970 105 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 RN7SKP92-201ENST00000517266 244 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIK1P39086 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.23□□□□□ -1.57
GRIK1P39086 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIK1P39086 OR4P1P-201ENST00000530808 1136 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.23□□□□□ -1.57
GRIK1P39086 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.23□□□□□ -1.57
GRIK1P39086 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIK1P39086 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIK1P39086 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.23□□□□□ -1.57
GRIK1P39086 AC104687.2-201ENST00000604442 342 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 PISRT1.1-201ENST00000616930 107 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 AC010378.1-201ENST00000619270 362 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
GRIK1P39086 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
GRIK1P39086 MAPK10-263ENST00000641052 4307 ntBASIC5.23□□□□□ -1.57
GRIK1P39086 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIK1P39086 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIK1P39086 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
GRIK1P39086 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.23□□□□□ -1.57
GRIK1P39086 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
GRIK1P39086 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GRIK1P39086 SAMMSON-226ENST00000642089 1582 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 RNU6-1243P-201ENST00000364028 107 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 RNU1-115P-201ENST00000365329 160 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 Y_RNA.428-201ENST00000384078 102 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 Y_RNA.562-201ENST00000384695 113 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 RNU6-328P-201ENST00000390887 106 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 RPL21P67-201ENST00000402896 478 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 RNU6-1050P-201ENST00000410388 107 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AC069218.2-201ENST00000411665 344 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 POLHP1-201ENST00000411806 470 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.22□□□□□ -1.57
GRIK1P39086 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GRIK1P39086 AC243428.1-201ENST00000421099 264 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.22□□□□□ -1.57
GRIK1P39086 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.22□□□□□ -1.57
GRIK1P39086 AL590632.1-201ENST00000424289 371 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AC137499.1-201ENST00000427602 88 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AC236972.1-201ENST00000433225 199 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.22□□□□□ -1.57
GRIK1P39086 RPL23AP89-201ENST00000439324 255 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.22□□□□□ -1.57
GRIK1P39086 AC007686.1-201ENST00000488511 463 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 RNA5SP384-201ENST00000516615 116 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 RNA5SP503-201ENST00000517047 117 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 IGKV2D-23-201ENST00000518179 286 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.22□□□□□ -1.57
GRIK1P39086 RPL21P12-201ENST00000559810 515 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.22□□□□□ -1.57
GRIK1P39086 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.22□□□□□ -1.57
GRIK1P39086 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.22□□□□□ -1.57
GRIK1P39086 AC020910.3-201ENST00000603701 874 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AC103710.2-201ENST00000609912 942 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AL049794.2-201ENST00000616301 365 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 AC103858.2-201ENST00000621471 543 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC5.22□□□□□ -1.57
GRIK1P39086 ASNSP1-201ENST00000518311 1939 ntBASIC5.22□□□□□ -1.57
GRIK1P39086 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
GRIK1P39086 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GRIK1P39086 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
GRIK1P39086 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.22□□□□□ -1.57
GRIK1P39086 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.21□□□□□ -1.57
GRIK1P39086 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
GRIK1P39086 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
GRIK1P39086 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GRIK1P39086 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.21□□□□□ -1.58
GRIK1P39086 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
GRIK1P39086 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
GRIK1P39086 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
GRIK1P39086 SNORA56-201ENST00000383966 129 ntBASIC5.21□□□□□ -1.58
GRIK1P39086 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.21□□□□□ -1.58
GRIK1P39086 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.21□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms