Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 AP001506.1-201ENST00000615444 211 ntBASIC3.88□□□□□ -1.79
HOXA11P31270 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.88□□□□□ -1.79
HOXA11P31270 AC136475.10-201ENST00000620253 385 ntBASIC3.88□□□□□ -1.79
HOXA11P31270 U4.6-201ENST00000621618 127 ntBASIC3.88□□□□□ -1.79
HOXA11P31270 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
HOXA11P31270 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA11P31270 AC093591.3-201ENST00000634516 308 ntBASIC3.88□□□□□ -1.79
HOXA11P31270 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA11P31270 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA11P31270 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HOXA11P31270 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA11P31270 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA11P31270 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.88□□□□□ -1.79
HOXA11P31270 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA11P31270 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA11P31270 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA11P31270 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HOXA11P31270 AC018555.1-201ENST00000567548 1980 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA11P31270 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 RNU5F-7P-201ENST00000363696 115 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 RNVU1-3-201ENST00000364313 161 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 RNA5SP72-201ENST00000364442 117 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 RNU6-657P-201ENST00000383904 107 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 RNU6-441P-201ENST00000384545 106 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 Y_RNA.554-201ENST00000384672 102 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 HMGN2P8-201ENST00000391458 268 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HOXA11P31270 HSPE1P8-201ENST00000406997 288 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 BTF3P7-201ENST00000407097 488 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 MIR1305-201ENST00000408300 86 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 RNA5SP39-201ENST00000411245 120 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC109780.2-201ENST00000413467 845 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC004552.1-201ENST00000419089 348 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA11P31270 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 RPL39P6-201ENST00000448289 150 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 ARPC3P5-201ENST00000448802 534 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 snoU109.1-201ENST00000459339 135 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 RPS4XP10-201ENST00000465034 731 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 RPS26P3-201ENST00000470205 348 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC025518.1-201ENST00000479856 347 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC090543.2-201ENST00000483963 348 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC004057.1-201ENST00000485827 348 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 FCF1P3-201ENST00000496394 590 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 HSPD1P15-201ENST00000505573 1122 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 PRDX4P1-201ENST00000507189 574 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC026784.1-201ENST00000507986 352 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA11P31270 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 IGKV2D-36-201ENST00000518643 226 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA11P31270 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.87□□□□□ -1.79
HOXA11P31270 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 MIR4637-201ENST00000582405 84 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 MIR4307-201ENST00000582802 84 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA11P31270 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA11P31270 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.87□□□□□ -1.79
HOXA11P31270 BCRP9-201ENST00000605312 388 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 HSPE1P14-201ENST00000605812 302 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC103710.1-201ENST00000610003 901 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 MIR7851-201ENST00000610611 160 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC096577.2-201ENST00000611455 153 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 AC007014.2-201ENST00000615581 479 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 CR381653.2-201ENST00000624041 768 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA11P31270 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA11P31270 AL732372.2-225ENST00000642124 456 ntBASIC3.87□□□□□ -1.79
HOXA11P31270 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA11P31270 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.87□□□□□ -1.79
HOXA11P31270 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA11P31270 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.87□□□□□ -1.79
HOXA11P31270 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA11P31270 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA11P31270 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HOXA11P31270 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.86□□□□□ -1.79
HOXA11P31270 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
HOXA11P31270 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HOXA11P31270 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA11P31270 ELF2P3-201ENST00000445099 1506 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
HOXA11P31270 RNU4-35P-201ENST00000362588 141 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 RNA5SP50-201ENST00000363731 107 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 RNU1-33P-201ENST00000364249 162 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 RNA5SP42-201ENST00000364278 115 ntBASIC3.86□□□□□ -1.79
HOXA11P31270 RNU6-761P-201ENST00000384148 107 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms