Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFRAP16234 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFRAP16234 OR4H12P-201ENST00000556269 907 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFRAP16234 MIR4999-201ENST00000585029 91 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.41□□□□□ -1.86
PDGFRAP16234 AL161756.2-201ENST00000604597 246 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC073657.2-201ENST00000605661 303 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AP002826.1-201ENST00000608835 315 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.41□□□□□ -1.86
PDGFRAP16234 AC009039.2-201ENST00000624524 529 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC073476.4-201ENST00000628409 72 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 AC103706.2-201ENST00000638080 240 ntBASIC3.41□□□□□ -1.86
PDGFRAP16234 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFRAP16234 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PDGFRAP16234 AC073346.2-201ENST00000624724 2058 ntBASIC3.4□□□□□ -1.86
PDGFRAP16234 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
PDGFRAP16234 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
PDGFRAP16234 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.4□□□□□ -1.86
PDGFRAP16234 RNU6-1214P-201ENST00000363650 109 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
PDGFRAP16234 RNU6-723P-201ENST00000383973 107 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 MTND4P13-201ENST00000402078 1023 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 RPL7P46-201ENST00000425129 740 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.4□□□□□ -1.87
PDGFRAP16234 AC090774.1-201ENST00000435925 246 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 ISCA1P2-201ENST00000438679 421 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 THAP5P1-201ENST00000439089 262 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.4□□□□□ -1.87
PDGFRAP16234 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.4□□□□□ -1.87
PDGFRAP16234 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.4□□□□□ -1.87
PDGFRAP16234 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.4□□□□□ -1.87
PDGFRAP16234 RN7SL442P-201ENST00000473804 320 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 AP001025.2-201ENST00000490908 477 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 AC104685.1-201ENST00000502445 371 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 AC034159.1-201ENST00000513885 583 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.4□□□□□ -1.87
PDGFRAP16234 AC104027.1-201ENST00000521887 300 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.4□□□□□ -1.87
PDGFRAP16234 AC034268.2-201ENST00000571784 482 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 MIR3921-201ENST00000577308 85 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.4□□□□□ -1.87
PDGFRAP16234 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.4□□□□□ -1.87
PDGFRAP16234 AC009464.1-201ENST00000615731 469 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 MIR7112-201ENST00000616126 65 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 AC006111.3-201ENST00000622137 383 ntBASIC3.4□□□□□ -1.87
PDGFRAP16234 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.4□□□□□ -1.87
PDGFRAP16234 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
PDGFRAP16234 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
PDGFRAP16234 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
PDGFRAP16234 RPL21P132-201ENST00000331267 462 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AL672167.1-206ENST00000356293 943 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 RNU6-76P-201ENST00000384060 104 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 U3.19-201ENST00000390893 196 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AL117351.1-201ENST00000438864 766 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC108734.1-201ENST00000439549 399 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 TRIM60P18-201ENST00000441518 828 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC115115.1-201ENST00000449927 248 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AL109741.2-201ENST00000455561 343 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AC109464.2-201ENST00000510242 943 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 RN7SKP287-201ENST00000516546 266 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AP001804.3-201ENST00000525146 880 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 RPL21P12-201ENST00000559810 515 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AC055876.1-202ENST00000567053 138 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 ZNF415P1-201ENST00000582279 1166 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC105224.1-201ENST00000587055 421 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AL606834.2-201ENST00000602954 668 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC008962.1-201ENST00000605729 304 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AC072039.2-201ENST00000608883 439 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AL442067.2-201ENST00000614033 363 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC021755.4-201ENST00000616620 456 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.39□□□□□ -1.87
PDGFRAP16234 AC091903.1-201ENST00000624322 454 ntBASIC3.39□□□□□ -1.87
PDGFRAP16234 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.39□□□□□ -1.87
PDGFRAP16234 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFRAP16234 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
PDGFRAP16234 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.38□□□□□ -1.87
PDGFRAP16234 AL391994.1-201ENST00000254724 282 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 RNU6-433P-201ENST00000363216 104 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 RNU6-1078P-201ENST00000364522 103 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PDGFRAP16234 AL357075.1-201ENST00000404107 726 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 MTCO1P17-201ENST00000411522 491 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 RPS7P13-201ENST00000413955 498 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.38□□□□□ -1.87
PDGFRAP16234 AL022400.1-201ENST00000423946 935 ntBASIC3.38□□□□□ -1.87
PDGFRAP16234 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms