Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL353678.1-201ENST00000422735 741 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 SAR1AP4-201ENST00000429225 591 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 AC007389.2-201ENST00000434630 306 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 TBCAP1-201ENST00000436520 327 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB1P09429 AL500522.2-201ENST00000448562 343 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 AC021146.5-201ENST00000503544 545 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGB1P09429 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.63□□□□□ -1.67
HMGB1P09429 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC4.63□□□□□ -1.67
HMGB1P09429 RNA5SP315-201ENST00000516340 116 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 RNA5SP312-201ENST00000517068 116 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 AC090616.2-202ENST00000584248 222 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 AL590392.1-201ENST00000604960 446 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 AP000770.2-201ENST00000623694 100 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.63□□□□□ -1.67
HMGB1P09429 PABPC1P9-201ENST00000426076 1612 ntBASIC4.63□□□□□ -1.67
HMGB1P09429 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB1P09429 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGB1P09429 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HMGB1P09429 API5P2-201ENST00000397055 1498 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB1P09429 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
HMGB1P09429 NDUFS5P1-201ENST00000405668 289 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 RPL21P65-201ENST00000406094 466 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 HMGN2P30-201ENST00000423237 256 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 AC009414.1-201ENST00000427200 443 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 C4BPAP2-201ENST00000428434 478 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 CYCSP32-201ENST00000440548 321 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 AC009296.1-201ENST00000443146 155 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 RANP8-201ENST00000444720 713 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 TPT1P12-201ENST00000448968 492 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 AC013267.1-201ENST00000458227 267 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 RPS26P21-201ENST00000475397 348 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 PRELID3BP5-201ENST00000508612 460 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGB1P09429 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB1P09429 RN7SKP258-201ENST00000517151 304 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 AC025881.1-201ENST00000518851 512 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 DUXAP2-201ENST00000519198 589 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB1P09429 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB1P09429 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB1P09429 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB1P09429 AC010653.1-201ENST00000571108 881 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HMGB1P09429 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB1P09429 AC105129.3-201ENST00000605455 485 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGB1P09429 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGB1P09429 MIR378J-201ENST00000611988 109 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 AC083809.1-201ENST00000615051 472 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 UCA1.1-201ENST00000620952 75 ntBASIC4.62□□□□□ -1.67
HMGB1P09429 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGB1P09429 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGB1P09429 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGB1P09429 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGB1P09429 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB1P09429 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGB1P09429 RNU6-1167P-201ENST00000363227 94 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 RNU6-1284P-201ENST00000363701 100 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HMGB1P09429 AC068538.1-201ENST00000376856 336 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 MTND4P20-201ENST00000424125 869 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB1P09429 HMGB1P27-201ENST00000431429 603 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB1P09429 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB1P09429 CECR9-201ENST00000453421 199 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 RPL26P9-201ENST00000457466 433 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGB1P09429 RN7SL601P-201ENST00000471221 293 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 AC112204.1-201ENST00000502591 103 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 SUMO2P6-201ENST00000505273 288 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 Y_RNA.717-201ENST00000517106 92 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGB1P09429 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB1P09429 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.61□□□□□ -1.67
HMGB1P09429 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGB1P09429 DUXAP4-201ENST00000603046 613 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 AL355877.2-201ENST00000603670 358 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 AC018638.7-201ENST00000605836 1114 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGB1P09429 AC068057.2-201ENST00000624047 895 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.61□□□□□ -1.67
HMGB1P09429 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HMGB1P09429 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HMGB1P09429 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGB1P09429 AC099654.7-201ENST00000635788 2127 ntBASIC4.6□□□□□ -1.67
HMGB1P09429 RNY4P16-201ENST00000364768 94 ntBASIC4.6□□□□□ -1.67
HMGB1P09429 RNU6-701P-201ENST00000384059 107 ntBASIC4.6□□□□□ -1.67
HMGB1P09429 HLFP1-201ENST00000402375 499 ntBASIC4.6□□□□□ -1.67
HMGB1P09429 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB1P09429 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGB1P09429 UBE2D3P1-201ENST00000436669 444 ntBASIC4.6□□□□□ -1.67
HMGB1P09429 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB1P09429 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.6□□□□□ -1.67
HMGB1P09429 RPS3AP22-201ENST00000488297 769 ntBASIC4.6□□□□□ -1.67
HMGB1P09429 RPS29P20-201ENST00000489592 171 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms