Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 RPS20P24-201ENST00000457473 361 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC067805.1-201ENST00000559344 470 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC026464.5-201ENST00000562497 722 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC095057.3-201ENST00000567102 1157 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC009318.4-201ENST00000620496 486 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 MIR6873-201ENST00000622788 63 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC104820.1-201ENST00000624183 307 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC010149.2-201ENST00000637608 315 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 AC099654.7-201ENST00000635788 2127 ntBASIC2.18□□□□□ -2.06
HLA-DQB2P05538 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.18□□□□□ -2.06
HLA-DQB2P05538 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 AL136372.1-201ENST00000403060 228 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 RNU2-25P-201ENST00000411041 191 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 OR51B8P-201ENST00000449892 769 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 NAMPTP2-201ENST00000505629 1115 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 AP001804.3-201ENST00000525146 880 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 EEF1B2P4-201ENST00000551398 348 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 MIR4435-1-201ENST00000582552 80 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 MIR5002-201ENST00000584713 97 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.17□□□□□ -2.06
HLA-DQB2P05538 RPL23AP78-201ENST00000599928 470 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 U73023.1-201ENST00000603134 700 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 AC064859.1-201ENST00000624741 174 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 ELF2P3-201ENST00000445099 1506 ntBASIC2.17□□□□□ -2.06
HLA-DQB2P05538 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 ANAPC10P1-201ENST00000395991 556 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 SNORA11.4-201ENST00000408823 129 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 RN7SKP223-201ENST00000410582 62 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 RNA5SP508-201ENST00000411327 119 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AL356320.1-201ENST00000429616 163 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AL591719.1-201ENST00000444669 744 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 MTCO3P11-201ENST00000455103 774 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 snoU109.4-201ENST00000458953 143 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 RPL37P25-201ENST00000507308 276 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AC010625.1-201ENST00000511296 403 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 RAC1P5-201ENST00000512182 576 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 RPL23AP94-201ENST00000512518 302 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 OR10V3P-201ENST00000525712 725 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 LSM6P2-201ENST00000552208 177 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 SNORD39.3-201ENST00000584451 71 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AC055876.5-201ENST00000605667 259 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AC011890.2-201ENST00000613393 294 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AL162233.1-201ENST00000620014 944 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 NUP58P1-201ENST00000502546 1738 ntBASIC2.16□□□□□ -2.06
HLA-DQB2P05538 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.16□□□□□ -2.06
HLA-DQB2P05538 AC010680.1-201ENST00000590024 3590 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 RNA5SP139-201ENST00000364340 117 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 SNORD82-201ENST00000365530 70 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 MIR525-201ENST00000384978 85 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AL023284.1-201ENST00000403956 276 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 OR51A3P-201ENST00000413596 924 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 USP9YP27-201ENST00000418455 438 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AL139413.1-201ENST00000421309 217 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AL035407.1-201ENST00000429211 571 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 SUMO1P4-201ENST00000429430 302 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 RNU6-1095P-201ENST00000516148 108 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 SNORA70.16-201ENST00000516390 95 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 RN7SKP40-201ENST00000517211 242 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.15□□□□□ -2.07
HLA-DQB2P05538 OR4R1P-201ENST00000529879 463 ntBASIC2.15□□□□□ -2.07
HLA-DQB2P05538 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms