Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC092470.1-201ENST00000546187 132 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 SETP2-201ENST00000553886 926 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC022069.1-201ENST00000582910 658 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 MIR5007-201ENST00000583098 95 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.69□□□□□ -1.98
CTDNEP1O95476 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC092650.2-201ENST00000619984 902 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AP003122.6-201ENST00000623831 495 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC068620.4-201ENST00000636730 1182 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AL136360.1-201ENST00000503377 1900 ntBASIC2.69□□□□□ -1.98
CTDNEP1O95476 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CTDNEP1O95476 SNORA14A-201ENST00000364773 135 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 CD24P4-201ENST00000382840 243 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RNU6-925P-201ENST00000384629 104 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RPL21P75-201ENST00000396599 483 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RPL21P28-201ENST00000401418 483 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AL592114.1-201ENST00000403842 483 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RNU4-78P-201ENST00000410940 126 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 Z93242.1-201ENST00000427102 353 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RPL31P54-201ENST00000429803 370 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 GTF2IP3-201ENST00000433887 494 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 CR769767.1-201ENST00000436337 346 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 RPL23AP58-201ENST00000440453 469 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 MTCO1P53-201ENST00000441633 699 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CTDNEP1O95476 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 RPL21P39-201ENST00000463605 483 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RPS23P3-201ENST00000470993 430 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC011979.1-201ENST00000472300 483 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RPL21P93-201ENST00000480465 489 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC233702.1-201ENST00000482905 502 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC087190.1-201ENST00000484462 480 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC093591.1-201ENST00000491435 481 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RPL21P16-201ENST00000495531 483 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC048346.1-201ENST00000510247 144 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC105914.1-201ENST00000511798 226 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTDNEP1O95476 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC025281.1-201ENST00000567026 265 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 AL445435.1-201ENST00000604232 665 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC009237.15-201ENST00000610252 501 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 AL158163.2-201ENST00000619110 700 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC018755.4-201ENST00000619715 454 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 MIR6766-201ENST00000622641 72 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC098679.5-201ENST00000624394 571 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 CTSLP2-204ENST00000629029 392 ntBASIC2.68□□□□□ -1.98
CTDNEP1O95476 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
CTDNEP1O95476 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
CTDNEP1O95476 AC006020.1-201ENST00000420179 1854 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
CTDNEP1O95476 MTND5P31-201ENST00000419366 1374 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 RNU6-839P-201ENST00000363347 108 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 RNU6-444P-201ENST00000383988 108 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 RNU6-1226P-201ENST00000384317 107 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 MIR23A-201ENST00000385245 73 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AL079342.2-201ENST00000403367 482 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AL139098.1-201ENST00000407291 389 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 FCF1P2-201ENST00000415284 583 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 MTND4P3-201ENST00000417829 541 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 MTCO2P23-201ENST00000425216 680 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC021451.1-201ENST00000523498 1129 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AP003122.3-201ENST00000526316 255 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 DEFB130C-202ENST00000530001 230 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 DNAJC8P1-201ENST00000554535 372 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AP001542.2-201ENST00000593141 364 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC245884.10-201ENST00000597355 337 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AF131215.7-201ENST00000602443 707 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AL355812.1-201ENST00000603215 216 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 DPRXP5-201ENST00000604662 539 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC112220.2-201ENST00000605513 533 ntBASIC2.67□□□□□ -1.98
CTDNEP1O95476 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC2.67□□□□□ -1.98
CTDNEP1O95476 AC009159.1-201ENST00000618386 642 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 294.3 ms