Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 RPL12P50-201ENST00000603116 116 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 RPL23AP92-201ENST00000603609 255 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AL031176.1-201ENST00000604554 466 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AL512506.1-201ENST00000613918 449 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AC093875.1-201ENST00000623688 504 ntBASIC2.33□□□□□ -2.04
UPK1AO00322 AL365361.1-201ENST00000566942 3481 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK1AO00322 RNU5B-1-201ENST00000363286 116 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RNU6-1155P-201ENST00000363554 107 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RNU6-799P-201ENST00000363567 107 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RNU6-207P-201ENST00000384137 107 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 MIR217-201ENST00000384817 110 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RNA5SP252-201ENST00000391131 119 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RPL22P22-201ENST00000395439 379 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 ARF4P3-201ENST00000397387 509 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK1AO00322 OR4K6P-201ENST00000416478 897 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RPL7P30-201ENST00000420888 709 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 MTCO2P17-201ENST00000424336 677 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 Z93242.1-201ENST00000427102 353 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 PSMA6P3-201ENST00000428242 164 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 FO393414.1-201ENST00000428697 1184 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RAC1P7-201ENST00000445367 377 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK1AO00322 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK1AO00322 VN1R10P-201ENST00000447106 875 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 AC073901.1-201ENST00000462471 408 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 RN7SL432P-201ENST00000484057 298 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 DSTNP2-201ENST00000504533 515 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK1AO00322 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.32□□□□□ -2.04
UPK1AO00322 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK1AO00322 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.32□□□□□ -2.04
UPK1AO00322 MIR5194-201ENST00000582634 120 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK1AO00322 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK1AO00322 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK1AO00322 AC245036.5-201ENST00000596330 847 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 AC005776.1-201ENST00000603164 290 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 AL035411.2-201ENST00000604022 421 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 AL160281.1-201ENST00000605307 311 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 AC140725.3-201ENST00000616193 880 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 AL138880.2-201ENST00000616214 239 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.32□□□□□ -2.04
UPK1AO00322 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
UPK1AO00322 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.32□□□□□ -2.04
UPK1AO00322 Z82195.2-201ENST00000612348 18351 ntBASIC2.32□□□□□ -2.04
UPK1AO00322 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
UPK1AO00322 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
UPK1AO00322 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC2.31□□□□□ -2.04
UPK1AO00322 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPK1AO00322 RNA5SP393-201ENST00000363423 117 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 SNORA80E-201ENST00000384744 137 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 RNU6-882P-201ENST00000391025 103 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 U3.26-201ENST00000391236 204 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 MIR1289-1-201ENST00000408836 144 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.31□□□□□ -2.04
UPK1AO00322 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.31□□□□□ -2.04
UPK1AO00322 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 RPL27AP8-201ENST00000424277 446 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.31□□□□□ -2.04
UPK1AO00322 RPS29P12-201ENST00000460178 152 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.31□□□□□ -2.04
UPK1AO00322 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.31□□□□□ -2.04
UPK1AO00322 AC009901.1-201ENST00000506703 541 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 SNORA70.16-201ENST00000516390 95 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC2.31□□□□□ -2.04
UPK1AO00322 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.31□□□□□ -2.04
UPK1AO00322 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.31□□□□□ -2.04
UPK1AO00322 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC2.31□□□□□ -2.04
UPK1AO00322 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.31□□□□□ -2.04
UPK1AO00322 AL049779.4-201ENST00000604500 156 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 AC097504.2-201ENST00000608088 454 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 U4.3-201ENST00000621047 82 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.31□□□□□ -2.04
UPK1AO00322 OR4G11P-202ENST00000642116 1414 ntBASIC2.31□□□□□ -2.04
UPK1AO00322 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPK1AO00322 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
UPK1AO00322 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
UPK1AO00322 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
UPK1AO00322 RNA5SP68-201ENST00000363885 119 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 RNA5SP139-201ENST00000364340 117 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 MIR518C-201ENST00000384822 101 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
UPK1AO00322 RNU6-1300P-201ENST00000391046 108 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AL122016.1-201ENST00000403365 367 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 RNU2-47P-201ENST00000410649 186 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AC098826.1-201ENST00000433943 471 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 AL096829.2-201ENST00000446582 742 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 MRPL42P4-201ENST00000453267 443 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AL359385.1-201ENST00000456509 365 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 RPS3P1-201ENST00000456781 192 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AP001486.1-201ENST00000463339 476 ntBASIC2.3□□□□□ -2.04
UPK1AO00322 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.3□□□□□ -2.04
UPK1AO00322 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms