Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RNA5SP88-201ENST00000365560 109 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 MIR9-3-201ENST00000385084 90 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AL589994.1-201ENST00000404962 340 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 RN7SKP192-201ENST00000411291 327 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 MTCO3P46-201ENST00000425787 232 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AL121601.2-201ENST00000438019 707 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AL357134.1-201ENST00000445848 426 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 RNA5SP310-201ENST00000459084 116 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AC087884.1-201ENST00000469738 328 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AC098862.1-201ENST00000504991 413 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 RNU6-970P-201ENST00000516312 107 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AC012254.4-201ENST00000588843 273 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AC106052.1-201ENST00000608029 497 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AL161423.1-201ENST00000613700 262 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AC006963.1-201ENST00000624003 1052 ntBASIC1.09□□□□□ -2.23
LINC01549A6NIU2 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC1.09□□□□□ -2.24
LINC01549A6NIU2 ZNF33BP1-201ENST00000452497 1834 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 MTND5P29-201ENST00000458676 1807 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 SNORA67.3-201ENST00000384366 140 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC105402.1-201ENST00000413336 545 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 CYCSP32-201ENST00000440548 321 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 RNF2P1-201ENST00000442955 1010 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC005297.2-201ENST00000450430 606 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 MTND3P6-201ENST00000485242 339 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC096576.1-201ENST00000489014 359 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 OR5H5P-201ENST00000503164 928 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC021146.2-201ENST00000504736 556 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 LEF1-218ENST00000512172 598 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC074029.2-201ENST00000551045 634 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 EIF4BP1-201ENST00000554881 351 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC010546.1-201ENST00000569391 485 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC053481.3-201ENST00000577881 843 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 MIR4287-201ENST00000579398 78 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC079089.3-201ENST00000603094 673 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC013444.2-201ENST00000603317 787 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AL033523.1-201ENST00000605153 153 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 MIR4496-201ENST00000635896 61 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
LINC01549A6NIU2 AC096656.1-201ENST00000623826 1364 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 WWP1P1-201ENST00000466609 2769 ntBASIC1.08□□□□□ -2.24
LINC01549A6NIU2 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 OR4G2P-202ENST00000641004 1759 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 MIR1304-201ENST00000408243 91 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 RNU6-193P-201ENST00000410977 107 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC013404.1-201ENST00000413068 249 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 RPL21P32-201ENST00000419877 477 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 RPL7P30-201ENST00000420888 709 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 VN1R108P-201ENST00000431580 830 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 HSPE1P21-201ENST00000438283 308 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 BNIP3P2-201ENST00000441221 577 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC009296.1-201ENST00000443146 155 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 HMGN2P10-201ENST00000448085 265 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC011352.3-201ENST00000505162 593 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC091965.2-201ENST00000512324 613 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC118465.1-201ENST00000513820 1271 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC025594.3-201ENST00000613068 790 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC011472.4-201ENST00000615848 491 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 AC091304.6-201ENST00000619761 202 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 MKKS-204ENST00000639674 192 ntBASIC1.07□□□□□ -2.24
LINC01549A6NIU2 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.07□□□□□ -2.24
LINC01549A6NIU2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC008669.1-201ENST00000565823 2178 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 RNU6-629P-201ENST00000384061 103 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 SNORA48.2-201ENST00000390926 124 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 SNORA48.7-201ENST00000391302 135 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 CISD1P1-201ENST00000393907 327 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AL161449.1-201ENST00000414531 1199 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 VN1R31P-201ENST00000417498 730 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AL353729.1-201ENST00000425044 720 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.06□□□□□ -2.24
LINC01549A6NIU2 MTCO1P45-201ENST00000431457 267 ntBASIC1.06□□□□□ -2.24
LINC01549A6NIU2 AC015922.2-201ENST00000435593 184 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms