Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 RPS20P1-201ENST00000434853 354 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 USP9YP8-201ENST00000441913 500 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AL353691.1-201ENST00000451332 387 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AC104308.1-201ENST00000454621 333 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RPS20P24-201ENST00000457473 361 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-420P-201ENST00000458780 107 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AP000852.1-201ENST00000472460 573 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 RNA5SP164-201ENST00000516533 110 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 CYCSP30-201ENST00000546447 172 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AC020914.4-201ENST00000597690 277 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 KC877982.1-201ENST00000602313 470 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 Y_RNA.804-201ENST00000615262 101 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 AL354685.2-201ENST00000448218 1447 ntBASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TCRBV5S1A1TA0A578 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 SNORD56.2-201ENST00000363242 71 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 Y_RNA.160-201ENST00000363677 92 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-108P-201ENST00000365558 107 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 MIR30B-201ENST00000384850 88 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-908P-201ENST00000410160 94 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 MRPL50P2-201ENST00000416821 482 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AL139247.1-201ENST00000422768 325 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC007283.2-201ENST00000424739 197 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 GPR143P-201ENST00000434155 205 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC098614.3-201ENST00000438957 440 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC093156.1-201ENST00000440382 670 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 MTND4LP16-201ENST00000440828 295 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 UBE2V1P7-201ENST00000446395 340 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 NANOGP10-201ENST00000453325 895 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC022364.2-201ENST00000457963 554 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC091951.2-201ENST00000500762 203 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 OR5H5P-201ENST00000503164 928 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC018710.1-201ENST00000506509 158 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-875P-201ENST00000516488 106 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 RNA5SP337-201ENST00000517007 109 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 MIR2116-201ENST00000517221 80 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC008489.1-201ENST00000524271 483 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 CBX3P5-201ENST00000552017 521 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 MIR3160-1-201ENST00000577972 85 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 UBE2V2P2-201ENST00000587677 504 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC005255.1-201ENST00000593748 216 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AL355812.1-201ENST00000603215 216 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC008945.2-201ENST00000606056 604 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC009994.1-201ENST00000606889 253 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 RMST_9.1-201ENST00000619945 193 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC022140.2-201ENST00000623500 188 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AL159972.1-201ENST00000625150 448 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 AC068724.3-201ENST00000625906 87 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 MIR4496-201ENST00000635896 61 ntBASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TCRBV5S1A1TA0A578 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 Y_RNA.11-201ENST00000362375 109 ntBASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 RNA5SP424-201ENST00000390988 115 ntBASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 RNU6-1009P-201ENST00000390996 107 ntBASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 U3.29-201ENST00000391296 212 ntBASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 HMGN1P24-201ENST00000412282 298 ntBASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 AC127526.1-201ENST00000417526 366 ntBASIC3.92□□□□□ -1.78
TCRBV5S1A1TA0A578 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms