Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 CALM2P3-201ENST00000400429 449 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC069157.1-201ENST00000421749 137 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 KCTD9P3-201ENST00000434597 1169 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 UBE2V1P13-201ENST00000436983 439 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AL121871.1-201ENST00000443413 436 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 RPL38P1-201ENST00000460914 211 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC023598.1-201ENST00000472521 361 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC092989.1-201ENST00000481235 277 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 ARL4AP2-201ENST00000507378 601 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC117522.1-201ENST00000509821 380 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC026726.1-201ENST00000512859 601 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 IGKV2D-23-201ENST00000518179 286 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC103783.1-201ENST00000520506 373 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 SETP2-201ENST00000553886 926 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC009101.1-201ENST00000568135 242 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC034268.2-201ENST00000571784 482 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 DUXAP4-201ENST00000603046 613 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC017083.3-201ENST00000609955 700 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 MLECP1-201ENST00000615893 709 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC002553.4-201ENST00000616896 331 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 AC068880.5-201ENST00000624331 290 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP25Q9UHP3 HSPA8P1-201ENST00000425843 1833 ntBASIC4.57□□□□□ -1.68
USP25Q9UHP3 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
USP25Q9UHP3 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.57□□□□□ -1.68
USP25Q9UHP3 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP25Q9UHP3 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 RPS4XP5-202ENST00000449995 1334 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 SNORD35B-201ENST00000363660 87 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 Y_RNA.402-201ENST00000383972 102 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 RNU6-1074P-201ENST00000383995 104 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 Y_RNA.453-201ENST00000384223 109 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 RPS3AP36-201ENST00000398190 775 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 RN7SKP285-201ENST00000410137 318 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 RNU4-55P-201ENST00000410731 137 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 RPL23AP26-201ENST00000412728 464 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 PIGFP2-201ENST00000421400 651 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP25Q9UHP3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 FAM103A2P-201ENST00000444122 354 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 MTND5P20-201ENST00000448677 143 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 NFU1P2-201ENST00000448700 469 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 MTCO3P20-201ENST00000454926 688 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 AC068587.1-201ENST00000483613 781 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 AC091167.1-201ENST00000492017 396 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 RN7SL604P-201ENST00000492589 296 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 AC093840.1-201ENST00000511599 336 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 RNU6-1073P-201ENST00000517182 106 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 AP001646.1-201ENST00000527936 915 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP25Q9UHP3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 HMGB1P33-201ENST00000563485 527 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 AC025627.2-201ENST00000576220 160 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
USP25Q9UHP3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 AC008277.2-201ENST00000605196 797 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 MIR8059-201ENST00000620427 81 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP25Q9UHP3 AL645937.1-201ENST00000641739 1652 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
USP25Q9UHP3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP25Q9UHP3 CCT4P2-201ENST00000233836 1548 ntBASIC4.56□□□□□ -1.68
USP25Q9UHP3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
USP25Q9UHP3 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP25Q9UHP3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 LARP1BP1-201ENST00000506036 1359 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
USP25Q9UHP3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 MIR383-201ENST00000362257 73 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 RNU6-797P-201ENST00000363101 109 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 Z98941.1-201ENST00000407764 100 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 SPA17P1-201ENST00000416656 452 ntBASIC4.55□□□□□ -1.68
USP25Q9UHP3 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.55□□□□□ -1.68
USP25Q9UHP3 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms