Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
VAPAQ9P0L0 RNU6-1066P-201ENST00000363573 105 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 U8.8-201ENST00000365399 135 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 MIR627-201ENST00000384979 97 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 Z93242.1-201ENST00000427102 353 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AC009414.1-201ENST00000427200 443 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 RPS24P13-201ENST00000442520 397 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AL500527.1-201ENST00000448532 255 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AC092798.1-201ENST00000458542 409 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AC008379.1-201ENST00000463655 464 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 S100A11P2-201ENST00000467589 312 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 RPL23AP70-201ENST00000483361 460 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 RPL30P5-201ENST00000494923 336 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 RN7SKP40-201ENST00000517211 242 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 OR5BN1P-201ENST00000532955 829 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AC093510.2-201ENST00000562820 896 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 MIR5194-201ENST00000582634 120 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AP001542.2-201ENST00000593141 364 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 RPAP2P1-201ENST00000603626 1168 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AL136363.1-201ENST00000605349 337 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AC091946.2-201ENST00000606105 291 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 AC093732.2-201ENST00000607950 274 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 TUG1_1.1-201ENST00000610654 145 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 CRYM-AS1-204ENST00000637983 556 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
VAPAQ9P0L0 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.4□□□□□ -2.03
VAPAQ9P0L0 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 FRG1BP-201ENST00000278882 761 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AL162578.1-201ENST00000406202 378 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AL512637.2-201ENST00000431287 1256 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AC090774.1-201ENST00000435925 246 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 NANOGNBP1-201ENST00000448444 480 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 BOLA3P3-201ENST00000505182 232 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 TPMTP1-201ENST00000592307 737 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 DUXAP10-204ENST00000612052 616 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AL354696.1-201ENST00000614652 497 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AC006213.4-201ENST00000616184 634 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
VAPAQ9P0L0 AC010680.1-201ENST00000590024 3590 ntBASIC2.39□□□□□ -2.03
VAPAQ9P0L0 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 SNORD62.1-201ENST00000362541 86 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 RNU6-270P-201ENST00000364131 105 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AL360182.1-201ENST00000397433 468 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 RPL26P6-201ENST00000440913 438 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC104978.1-201ENST00000449387 391 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 USP9YP34-201ENST00000453983 808 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC073901.1-201ENST00000462471 408 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC008716.1-201ENST00000511084 513 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 OR5BM1P-201ENST00000512021 366 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC113192.3-201ENST00000529152 742 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 HMGB1P14-201ENST00000557424 591 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC093536.2-201ENST00000565257 1406 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC010546.1-201ENST00000569391 485 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC103810.1-201ENST00000579873 453 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC098483.2-201ENST00000603158 454 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC007179.3-201ENST00000604976 235 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AP001521.1-201ENST00000609150 300 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AL137847.3-201ENST00000611521 109 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AL592148.2-201ENST00000612210 372 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 UCA1.1-201ENST00000620952 75 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC011330.2-201ENST00000621680 635 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 AC010872.1-201ENST00000624225 675 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 U6.101-201ENST00000637707 76 ntBASIC2.38□□□□□ -2.03
VAPAQ9P0L0 ZNF519P1-201ENST00000449011 1626 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms