Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 MTCO1P42-201ENST00000457379 726 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC008155.2-201ENST00000464337 397 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC021382.1-201ENST00000483523 359 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC004062.1-201ENST00000509926 645 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 RNU6-1073P-201ENST00000517182 106 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC025881.1-201ENST00000518851 512 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 MTND4LP18-201ENST00000526864 291 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC109635.4-202ENST00000531666 412 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC008507.1-201ENST00000587506 734 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AP000403.1-201ENST00000603349 851 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 RMST_8.1-201ENST00000610287 165 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC084757.4-201ENST00000616350 526 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 AC004777.1-201ENST00000624317 287 ntBASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
SPHK1Q9NYA1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC092125.1-201ENST00000562568 1995 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 RNU4-21P-201ENST00000362802 126 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 RNA5SP50-201ENST00000363731 107 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 RNU6-114P-201ENST00000384704 105 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 Z99497.1-201ENST00000421282 135 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 RPL37P21-201ENST00000435890 276 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC129850.1-201ENST00000436203 508 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 MTND4P32-201ENST00000437189 1237 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 THAP5P1-201ENST00000439089 262 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 TRIM60P18-201ENST00000441518 828 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 COX6CP12-201ENST00000446748 202 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AL122001.1-201ENST00000457027 370 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC034222.1-201ENST00000494052 532 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC080014.1-201ENST00000496877 1201 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 MTND5P13-201ENST00000513046 1079 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 RNU6-528P-201ENST00000516926 100 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 IGKV2-26-201ENST00000518305 343 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 HIGD1AP10-201ENST00000527837 282 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AP003497.1-201ENST00000528472 562 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC091489.2-201ENST00000566263 604 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AP005136.1-201ENST00000579765 429 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 PIGPP4-201ENST00000584447 307 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AL365503.1-201ENST00000605247 905 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC239868.4-201ENST00000608318 671 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC027807.2-201ENST00000616099 408 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AL353748.2-201ENST00000622148 471 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 AC093591.3-201ENST00000634516 308 ntBASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
SPHK1Q9NYA1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SPHK1Q9NYA1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SPHK1Q9NYA1 CCT4P2-201ENST00000233836 1548 ntBASIC3.34□□□□□ -1.88
SPHK1Q9NYA1 CEP170P1-201ENST00000502249 4587 ntBASIC3.34□□□□□ -1.88
SPHK1Q9NYA1 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SPHK1Q9NYA1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 AL021368.2-201ENST00000606125 5352 ntBASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 SNORA63.1-201ENST00000362493 131 ntBASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 RNU6-1155P-201ENST00000363554 107 ntBASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 RNU4-40P-201ENST00000364351 143 ntBASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 CCNG1P1-201ENST00000406783 885 ntBASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 BX323014.1-201ENST00000412876 237 ntBASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 RPL31P12-201ENST00000422587 358 ntBASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 CYCSP46-201ENST00000423569 204 ntBASIC3.33□□□□□ -1.88
SPHK1Q9NYA1 AL662791.1-201ENST00000441992 928 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms