Protein–RNA interactions for Protein: Q9NVE4

CCDC87, Coiled-coil domain-containing protein 87, humanhuman

Predictions only

Length 849 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC87Q9NVE4 RN7SL132P-201ENST00000478131 296 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AC135721.1-201ENST00000497954 479 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 RNA5SP143-201ENST00000516936 115 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 Y_RNA.718-201ENST00000517110 102 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AC100870.1-201ENST00000522035 505 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 CYP2C61P-201ENST00000604072 290 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AC113403.1-201ENST00000604910 193 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AC012443.1-201ENST00000605605 231 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AC092807.2-201ENST00000609367 243 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AC006329.2-201ENST00000611491 394 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 AL390240.1-201ENST00000612950 384 ntBASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCDC87Q9NVE4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 MIR383-201ENST00000362257 73 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 SNORD113-7-201ENST00000363762 77 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 SNORD115-7-201ENST00000365306 82 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 MT-TC-201ENST00000387405 66 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 MIR1250-201ENST00000408098 113 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 VN1R36P-201ENST00000414936 291 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 EIF4HP2-201ENST00000424380 563 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AL358232.1-201ENST00000448030 501 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC107399.1-201ENST00000451226 265 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 MTND4P17-201ENST00000470444 350 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC012181.1-201ENST00000479895 423 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC090096.1-201ENST00000489168 390 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 TRBVA-201ENST00000498804 316 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC005798.1-201ENST00000513715 387 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 RNU6-1092P-201ENST00000516955 87 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 SNRPGP17-201ENST00000603780 214 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 DPPA3P3-201ENST00000603842 430 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC113194.1-201ENST00000606037 500 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC116312.1-201ENST00000606841 314 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AL596275.2-204ENST00000641628 552 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AL596275.2-206ENST00000641957 626 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AL359893.1-201ENST00000447628 1580 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 EXOC5P1-201ENST00000510543 1969 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 PABPC1P7-201ENST00000413177 1513 ntBASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.74□□□□□ -1.49
CCDC87Q9NVE4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AC092376.2-201ENST00000622621 4116 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 GABPAP-201ENST00000419271 1356 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 RNU6-1284P-201ENST00000363701 100 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 Y_RNA.339-201ENST00000365325 102 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 RNU4-46P-201ENST00000410818 138 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AL139095.3-201ENST00000419672 1203 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 PRPS1P1-201ENST00000445305 876 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 GEMIN8P3-201ENST00000445417 720 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AL031584.1-201ENST00000447169 754 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AL162395.1-201ENST00000457882 422 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 RNU7-66P-201ENST00000459469 62 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AC027575.1-201ENST00000481064 460 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 RNU1-45P-201ENST00000517191 141 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 MIR4293-201ENST00000584305 78 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AL627309.6-201ENST00000606857 840 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 AC084781.2-201ENST00000615568 161 ntBASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CCDC87Q9NVE4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms