Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC091564.4-201ENST00000533934 2194 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AL512347.1-201ENST00000566420 503 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 MTND1P8-201ENST00000571424 950 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 MIR4513-201ENST00000581077 86 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC131235.4-201ENST00000609288 620 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 MIR7106-201ENST00000612419 65 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC099506.2-201ENST00000623074 221 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC095031.1-201ENST00000623685 672 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 AC073476.4-201ENST00000628409 72 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 OR4G11P-202ENST00000642116 1414 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
HPS4Q9NQG7 MTND5P24-201ENST00000438892 1767 ntBASIC3.23□□□□□ -1.89
HPS4Q9NQG7 SGO1P2-201ENST00000429458 1589 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 RNU6-1155P-201ENST00000363554 107 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 Y_RNA.311-201ENST00000365068 96 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 RNU6-906P-201ENST00000384700 70 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 RN7SKP220-201ENST00000410611 288 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 RPL21P134-201ENST00000453468 483 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 RPL23AP31-201ENST00000456160 467 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 OR5AK1P-201ENST00000524837 922 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 AC239860.2-201ENST00000525886 270 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 CR383656.7-201ENST00000548164 174 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 DUXAP4-201ENST00000603046 613 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 AC231657.1-201ENST00000624313 397 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 MIR622-201ENST00000638396 96 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 AL079343.1-201ENST00000572358 1771 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 AL365361.1-201ENST00000566942 3481 ntBASIC3.22□□□□□ -1.89
HPS4Q9NQG7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.22□□□□□ -1.89
HPS4Q9NQG7 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.89
HPS4Q9NQG7 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.21□□□□□ -1.89
HPS4Q9NQG7 AL356473.1-201ENST00000406203 1408 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC099786.3-201ENST00000565735 1410 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 RNU6-621P-201ENST00000364752 109 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 RNU6-636P-201ENST00000384598 107 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL031679.1-201ENST00000400616 525 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL356131.1-201ENST00000405826 414 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 RNU6-584P-201ENST00000410350 95 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL592310.1-201ENST00000414330 671 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 MRPL50P2-201ENST00000416821 482 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 ATG3P1-201ENST00000419507 911 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 MTCYBP45-201ENST00000435243 565 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 CST9LP2-201ENST00000437612 320 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC016696.1-201ENST00000446949 318 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC093392.2-201ENST00000450682 337 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 MTND1P16-201ENST00000465177 898 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 GTF2IP9-201ENST00000502460 301 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC116353.3-201ENST00000511215 249 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC109445.1-201ENST00000512356 383 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC245166.1-201ENST00000521012 253 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC022690.1-201ENST00000526681 550 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 DNAJC8P1-201ENST00000554535 372 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL049838.1-201ENST00000563647 981 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL031176.1-201ENST00000604554 466 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC009974.1-201ENST00000608881 455 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL050303.3-201ENST00000613704 284 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC116618.1-201ENST00000634617 774 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AL390862.1-201ENST00000635467 1469 ntBASIC3.21□□□□□ -1.9
HPS4Q9NQG7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.21□□□□□ -1.9
HPS4Q9NQG7 AC093010.3-201ENST00000570269 15214 ntBASIC3.2□□□□□ -1.9
HPS4Q9NQG7 SNORA71.1-201ENST00000364523 117 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 137.9 ms