Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 RNU6-181P-201ENST00000363225 107 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 RNU5E-4P-201ENST00000364931 120 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 RNU6-359P-201ENST00000365466 108 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
VGLL1Q99990 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AC108032.1-201ENST00000416706 207 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 RPL30P16-201ENST00000419341 429 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AL353193.1-201ENST00000421444 268 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AC233728.2-201ENST00000425348 757 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 DPPA2P1-201ENST00000428060 556 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.94□□□□□ -1.94
VGLL1Q99990 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.94□□□□□ -1.94
VGLL1Q99990 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 TXNP1-201ENST00000441872 371 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 MTATP6P30-201ENST00000443540 664 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 MTND2P24-201ENST00000453434 806 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 RPS20P32-201ENST00000456044 356 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AP1S2P1-201ENST00000457344 379 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.94□□□□□ -1.94
VGLL1Q99990 CEACAMP4-201ENST00000457676 421 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
VGLL1Q99990 RN7SL459P-201ENST00000481078 302 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 RPS29P25-201ENST00000481709 171 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AC055855.1-201ENST00000489563 579 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AC091167.1-201ENST00000492017 396 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 RPS27AP13-201ENST00000498403 237 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.94□□□□□ -1.94
VGLL1Q99990 PRDX4P1-201ENST00000507189 574 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AC074344.1-201ENST00000512823 224 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 HIGD1AP3-201ENST00000515857 278 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 RNU6-445P-201ENST00000516949 107 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 RAB9BP1-201ENST00000519581 626 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AL161713.1-201ENST00000555538 145 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC2.94□□□□□ -1.94
VGLL1Q99990 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 AL356432.3-201ENST00000568952 465 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 MIR4458-201ENST00000578872 75 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC2.94□□□□□ -1.94
VGLL1Q99990 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AP000907.4-201ENST00000604143 237 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AC067959.1-201ENST00000604334 379 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AL049634.3-201ENST00000604968 457 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
VGLL1Q99990 MIR8059-201ENST00000620427 81 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 MIR7641-1-201ENST00000627518 61 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AC010149.2-201ENST00000637608 315 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 MIR7153-201ENST00000637758 57 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 AC099654.14-201ENST00000638599 341 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 AC024560.2-201ENST00000507981 1497 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 CR848007.1-201ENST00000442354 1699 ntBASIC2.94□□□□□ -1.94
VGLL1Q99990 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC2.94□□□□□ -1.94
VGLL1Q99990 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC2.94□□□□□ -1.94
VGLL1Q99990 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
VGLL1Q99990 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.93□□□□□ -1.94
VGLL1Q99990 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.93□□□□□ -1.94
VGLL1Q99990 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VGLL1Q99990 AC090229.1-201ENST00000590983 1609 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
VGLL1Q99990 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC2.93□□□□□ -1.94
VGLL1Q99990 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.93□□□□□ -1.94
VGLL1Q99990 API5-210ENST00000534600 1760 ntTSL 5 BASIC2.93□□□□□ -1.94
VGLL1Q99990 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
VGLL1Q99990 AC138915.3-201ENST00000562908 1389 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
VGLL1Q99990 Y_RNA.1-201ENST00000352915 104 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 RNU1-32P-201ENST00000363937 159 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 Y_RNA.409-201ENST00000383990 98 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
VGLL1Q99990 HLFP1-201ENST00000402375 499 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 AL590704.1-201ENST00000402856 794 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 FGF7P8-201ENST00000402994 292 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 HSPE1P8-201ENST00000406997 288 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.93□□□□□ -1.94
VGLL1Q99990 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC2.93□□□□□ -1.94
VGLL1Q99990 AC133104.1-201ENST00000429100 218 ntBASIC2.93□□□□□ -1.94
VGLL1Q99990 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC2.93□□□□□ -1.94
VGLL1Q99990 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms