Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.21□□□□□ -1.74
SMOQ99835 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.21□□□□□ -1.74
SMOQ99835 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.21□□□□□ -1.74
SMOQ99835 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.21□□□□□ -1.74
SMOQ99835 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.21□□□□□ -1.74
SMOQ99835 OR4T1P-201ENST00000554933 911 ntBASIC4.21□□□□□ -1.74
SMOQ99835 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.21□□□□□ -1.74
SMOQ99835 AC106785.1-201ENST00000565935 262 ntBASIC4.21□□□□□ -1.74
SMOQ99835 AC120057.2-201ENST00000571520 271 ntBASIC4.21□□□□□ -1.74
SMOQ99835 MIR4286-201ENST00000580651 93 ntBASIC4.21□□□□□ -1.74
SMOQ99835 AL669831.4-202ENST00000590817 238 ntBASIC4.21□□□□□ -1.74
SMOQ99835 AL606490.9-201ENST00000603331 271 ntBASIC4.21□□□□□ -1.74
SMOQ99835 BNIP3P9-201ENST00000603714 553 ntBASIC4.21□□□□□ -1.74
SMOQ99835 AC091167.4-201ENST00000605079 184 ntBASIC4.21□□□□□ -1.74
SMOQ99835 AC009994.1-201ENST00000606889 253 ntBASIC4.21□□□□□ -1.74
SMOQ99835 AC007038.2-201ENST00000608095 740 ntBASIC4.21□□□□□ -1.74
SMOQ99835 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.21□□□□□ -1.74
SMOQ99835 AL158196.1-201ENST00000616786 434 ntBASIC4.21□□□□□ -1.74
SMOQ99835 YWHAEP7-203ENST00000622054 312 ntBASIC4.21□□□□□ -1.74
SMOQ99835 FER-210ENST00000628534 558 ntTSL 5 BASIC4.21□□□□□ -1.74
SMOQ99835 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.21□□□□□ -1.74
SMOQ99835 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
SMOQ99835 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SMOQ99835 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
SMOQ99835 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.21□□□□□ -1.74
SMOQ99835 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SMOQ99835 AC011266.1-201ENST00000624119 3569 ntBASIC4.2□□□□□ -1.74
SMOQ99835 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMOQ99835 ZNF680P1-201ENST00000436625 1469 ntBASIC4.2□□□□□ -1.74
SMOQ99835 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMOQ99835 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SMOQ99835 RNU6-1097P-201ENST00000363586 107 ntBASIC4.2□□□□□ -1.74
SMOQ99835 RNU6-39P-201ENST00000384344 107 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.2□□□□□ -1.74
SMOQ99835 MRPL50P2-201ENST00000416821 482 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC4.2□□□□□ -1.74
SMOQ99835 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.2□□□□□ -1.74
SMOQ99835 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC4.2□□□□□ -1.74
SMOQ99835 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC073587.1-201ENST00000447093 876 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.2□□□□□ -1.74
SMOQ99835 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.2□□□□□ -1.74
SMOQ99835 RPS17P13-201ENST00000448974 407 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.2□□□□□ -1.74
SMOQ99835 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.2□□□□□ -1.74
SMOQ99835 AC007537.2-201ENST00000472093 511 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC083798.1-201ENST00000472671 131 ntBASIC4.2□□□□□ -1.74
SMOQ99835 MTCYBP18-201ENST00000501056 747 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC008628.2-201ENST00000502605 298 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SMOQ99835 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.2□□□□□ -1.74
SMOQ99835 RNU6-835P-201ENST00000516974 104 ntBASIC4.2□□□□□ -1.74
SMOQ99835 RNA5SP179-201ENST00000517284 121 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AL133271.1-201ENST00000538229 291 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.2□□□□□ -1.74
SMOQ99835 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.2□□□□□ -1.74
SMOQ99835 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.2□□□□□ -1.74
SMOQ99835 COX6CP3-201ENST00000580869 223 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.2□□□□□ -1.74
SMOQ99835 AL592436.1-201ENST00000605135 558 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC103710.2-201ENST00000609912 942 ntBASIC4.2□□□□□ -1.74
SMOQ99835 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SMOQ99835 AL773545.4-201ENST00000637262 310 ntBASIC4.2□□□□□ -1.74
SMOQ99835 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.2□□□□□ -1.74
SMOQ99835 AL513478.4-201ENST00000641636 310 ntBASIC4.2□□□□□ -1.74
SMOQ99835 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.2□□□□□ -1.74
SMOQ99835 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.2□□□□□ -1.74
SMOQ99835 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SMOQ99835 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SMOQ99835 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMOQ99835 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMOQ99835 ZNF33CP-201ENST00000432492 2030 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC073544.1-201ENST00000600110 1595 ntBASIC4.19□□□□□ -1.74
SMOQ99835 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SMOQ99835 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SMOQ99835 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SMOQ99835 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.19□□□□□ -1.74
SMOQ99835 RNA5SP52-201ENST00000362448 134 ntBASIC4.19□□□□□ -1.74
SMOQ99835 RNU6-451P-201ENST00000362921 107 ntBASIC4.19□□□□□ -1.74
SMOQ99835 RNU6-797P-201ENST00000363101 109 ntBASIC4.19□□□□□ -1.74
SMOQ99835 RNU5E-8P-201ENST00000363502 116 ntBASIC4.19□□□□□ -1.74
SMOQ99835 Y_RNA.160-201ENST00000363677 92 ntBASIC4.19□□□□□ -1.74
SMOQ99835 RNY3P3-201ENST00000363816 102 ntBASIC4.19□□□□□ -1.74
SMOQ99835 RNU6-213P-201ENST00000384051 104 ntBASIC4.19□□□□□ -1.74
SMOQ99835 RNU6-74P-201ENST00000384235 107 ntBASIC4.19□□□□□ -1.74
SMOQ99835 RNU6-821P-201ENST00000390995 107 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AL356776.1-201ENST00000406574 447 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.19□□□□□ -1.74
SMOQ99835 AC137499.1-201ENST00000427602 88 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC4.19□□□□□ -1.74
SMOQ99835 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.19□□□□□ -1.74
SMOQ99835 AL138799.3-201ENST00000438968 350 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.19□□□□□ -1.74
SMOQ99835 AC093156.1-201ENST00000440382 670 ntBASIC4.19□□□□□ -1.74
SMOQ99835 BNIP3P2-201ENST00000441221 577 ntBASIC4.19□□□□□ -1.74
SMOQ99835 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.19□□□□□ -1.74
SMOQ99835 USP9YP8-201ENST00000441913 500 ntBASIC4.19□□□□□ -1.74
SMOQ99835 UBDP1-202ENST00000457888 382 ntBASIC4.19□□□□□ -1.74
SMOQ99835 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.19□□□□□ -1.74
SMOQ99835 snoU109.4-201ENST00000458953 143 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms