Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC079395.1-201ENST00000510981 262 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 SNORA3.4-201ENST00000515969 96 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 RNY4P37-201ENST00000516225 96 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC093331.1-201ENST00000521474 169 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC004024.1-201ENST00000549244 247 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 OR4T1P-201ENST00000554933 911 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC009712.1-201ENST00000564938 316 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 MTCO3P24-201ENST00000572729 782 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 MIR2682-201ENST00000580305 110 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL353778.1-201ENST00000603149 408 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL133393.1-201ENST00000603277 287 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC011451.2-201ENST00000604303 598 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL139344.1-201ENST00000605228 195 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL360219.1-201ENST00000610230 366 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AL590099.1-201ENST00000615276 138 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 AC008568.2-201ENST00000623862 2313 ntBASIC3.32□□□□□ -1.88
RTL3Q8N8U3 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RTL3Q8N8U3 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 SAR1AP2-201ENST00000392696 594 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 EI24P2-201ENST00000397776 1076 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 TPMTP2-201ENST00000414372 726 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 NDUFB4P6-201ENST00000436819 366 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 ISCA1P2-201ENST00000438679 421 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC006499.2-201ENST00000513470 337 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 DUXAP1-201ENST00000556632 463 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 MIR3186-201ENST00000577404 85 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 OR4K7P-201ENST00000580232 945 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AL031985.2-201ENST00000600955 480 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AL606834.2-201ENST00000602954 668 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 BBIP1P1-201ENST00000602999 279 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC097065.2-201ENST00000608159 533 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AL451074.6-201ENST00000608512 729 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AP000254.1-201ENST00000609934 520 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 MIR7112-201ENST00000616126 65 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AL357080.1-201ENST00000617394 239 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC048344.4-201ENST00000619744 527 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AC092628.2-201ENST00000622492 339 ntBASIC3.31□□□□□ -1.88
RTL3Q8N8U3 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTL3Q8N8U3 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC005832.2-201ENST00000538921 1430 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 MTND5P1-201ENST00000445440 1375 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 ZNF542P-204ENST00000482727 1305 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 RNU5A-2P-201ENST00000384337 116 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 RNY3P9-201ENST00000384727 106 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 RPS3AP24-201ENST00000407896 734 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 RNA5SP44-201ENST00000410446 133 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AL353705.1-201ENST00000433468 480 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 Z83846.1-201ENST00000446798 265 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC115115.1-201ENST00000449927 248 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 ELOCP23-201ENST00000452014 332 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 RNU7-136P-201ENST00000458819 69 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 RN7SL807P-201ENST00000470923 297 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 RPS4XP22-201ENST00000480755 780 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC093534.1-201ENST00000504977 132 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC111000.2-201ENST00000507775 550 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC116353.3-201ENST00000511215 249 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC017037.2-201ENST00000513850 890 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC002400.1-201ENST00000569310 726 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 MIR5680-201ENST00000577577 84 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC105224.1-201ENST00000587055 421 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 AC008507.1-201ENST00000587506 734 ntBASIC3.3□□□□□ -1.88
RTL3Q8N8U3 BNIP3P33-201ENST00000598912 569 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms