Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AL133153.1-201ENST00000557756 303 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC090877.1-201ENST00000561418 344 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC087481.2-201ENST00000565492 330 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 MIR4277-201ENST00000578298 84 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 MIR98-201ENST00000606724 119 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC004908.2-201ENST00000609090 574 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AL592295.2-201ENST00000612578 206 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 AC011944.2-201ENST00000624440 683 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AL160394.1-201ENST00000624765 724 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 AL157786.1-207ENST00000627771 695 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 LRRC77P-213ENST00000637727 880 ntBASIC3.5□□□□□ -1.85
SHFQ7M4L6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHFQ7M4L6 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
SHFQ7M4L6 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 OR4G2P-201ENST00000328113 903 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 RNY3P13-201ENST00000365542 102 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 RNU6-637P-201ENST00000384050 107 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 Y_RNA.554-201ENST00000384672 102 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 U3.22-201ENST00000391120 215 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 RNU6-516P-201ENST00000411381 104 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 HMGN1P24-201ENST00000412282 298 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 CCDC58P2-201ENST00000417131 366 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 TOMM22P1-201ENST00000418578 312 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 MTCO2P11-201ENST00000431069 680 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 MTND3P21-201ENST00000433774 331 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC132479.1-201ENST00000449160 144 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 RNU7-59P-201ENST00000459101 61 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC105137.1-201ENST00000484355 562 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC135721.1-201ENST00000497954 479 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 HMGB1P29-201ENST00000505659 499 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC011352.1-201ENST00000512300 793 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 RNU6-1220P-201ENST00000517126 108 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC103783.1-201ENST00000520506 373 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC022616.3-201ENST00000523940 148 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 FAM92A1P1-201ENST00000528023 890 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC009643.1-201ENST00000532030 391 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 MLECP1-201ENST00000615893 709 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 U4.5-201ENST00000617137 123 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 MIR6863-201ENST00000636112 90 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC010733.2-201ENST00000589496 5702 ntBASIC3.49□□□□□ -1.85
SHFQ7M4L6 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SHFQ7M4L6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SHFQ7M4L6 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SHFQ7M4L6 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHFQ7M4L6 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHFQ7M4L6 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 OR1S2-201ENST00000302592 978 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RNU6-181P-201ENST00000363225 107 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RNU6-335P-201ENST00000364563 113 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
SHFQ7M4L6 SNORA20.2-201ENST00000383922 131 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RNU6-1103P-201ENST00000384150 107 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 RNU6ATAC25P-201ENST00000408798 117 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.48□□□□□ -1.85
SHFQ7M4L6 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 TBCAP1-201ENST00000436520 327 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 USP9YP7-201ENST00000436723 430 ntBASIC3.48□□□□□ -1.85
SHFQ7M4L6 MTATP6P13-201ENST00000438531 667 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms