Protein–RNA interactions for Protein: Q6ZS62

COLCA1, Colorectal cancer-associated protein 1, humanhuman

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1Q6ZS62 CEACAMP10-202ENST00000495431 496 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC020893.1-201ENST00000502452 580 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC008958.1-201ENST00000511047 682 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 SEPT14P4-201ENST00000513445 186 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 RNA5SP49-201ENST00000516450 115 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 SCARNA24.1-201ENST00000516465 137 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 FO082796.1-201ENST00000523795 183 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC069240.1-201ENST00000548774 375 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 ARL2BPP2-201ENST00000550907 489 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 MIR3146-201ENST00000580367 79 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC113194.1-201ENST00000606037 500 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AC008785.1-201ENST00000624475 456 ntBASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COLCA1Q6ZS62 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 GABPAP-201ENST00000419271 1356 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RPL7P26-201ENST00000333817 754 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RNA5SP258-201ENST00000362750 119 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 Y_RNA.142-201ENST00000363491 102 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RNU1-132P-201ENST00000364300 164 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RNA5SP509-201ENST00000364577 119 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 Y_RNA.356-201ENST00000365475 113 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RNU6-74P-201ENST00000384235 107 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 SNORA70E-201ENST00000384492 135 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 MIR1-2-201ENST00000384961 85 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 snosnR66.1-201ENST00000391095 99 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 SSXP10-201ENST00000402595 565 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RNU2-9P-201ENST00000410194 145 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 EZH2P1-201ENST00000431167 291 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RPL36AP53-201ENST00000432891 316 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RPL23AP89-201ENST00000439324 255 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC011276.1-201ENST00000469688 323 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 RN7SL303P-201ENST00000469773 251 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC233702.1-201ENST00000482905 502 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC025445.1-201ENST00000502728 300 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 PCBP2P3-201ENST00000509726 843 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC021146.1-201ENST00000511202 716 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC010486.1-201ENST00000511793 424 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 OR4P1P-201ENST00000530808 1136 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AP000907.2-201ENST00000530827 353 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC092470.1-201ENST00000546187 132 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 MIR4284-201ENST00000578924 81 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC018638.8-201ENST00000588755 281 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 Z84480.1-201ENST00000605131 311 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC064801.1-201ENST00000612025 407 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 MIR7702-201ENST00000621931 59 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AL122126.1-201ENST00000546905 1318 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC011978.2-201ENST00000569835 2054 ntBASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
COLCA1Q6ZS62 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.65□□□□□ -1.82
COLCA1Q6ZS62 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
COLCA1Q6ZS62 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
COLCA1Q6ZS62 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
COLCA1Q6ZS62 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
COLCA1Q6ZS62 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC3.65□□□□□ -1.82
COLCA1Q6ZS62 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.65□□□□□ -1.82
COLCA1Q6ZS62 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms