Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AL049780.3-201ENST00000624612 1583 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 Y_RNA.25-201ENST00000362528 102 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 U3.6-201ENST00000363622 211 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 SNORD116.1-201ENST00000365628 92 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 XGY1-201ENST00000381172 446 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 RPS4XP3-201ENST00000398541 413 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 RPL7P10-201ENST00000417407 739 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 RPL27AP8-201ENST00000424277 446 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AL589880.1-201ENST00000448271 287 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 PNPLA4P1-201ENST00000458328 305 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 snoU109.4-201ENST00000458953 143 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 SNORD109B-201ENST00000458961 67 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 SNORD109A-201ENST00000459128 67 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 RPL21P41-201ENST00000459863 264 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC126389.1-201ENST00000477436 290 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC010460.2-201ENST00000509054 677 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 RN7SKP31-201ENST00000516354 278 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 SCARNA1-201ENST00000517138 166 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 OR4P1P-201ENST00000530808 1136 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 SNRPGP16-201ENST00000533275 226 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC087481.2-201ENST00000565492 330 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC069545.1-201ENST00000605671 358 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC027449.1-201ENST00000608890 407 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC005332.6-201ENST00000613178 446 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AC090617.7-201ENST00000623952 126 ntBASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
SHROOM1Q2M3G4 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 MAPK10-322ENST00000641485 4530 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 RNU4-68P-201ENST00000364314 141 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 SNORA9.2-201ENST00000365361 133 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-1074P-201ENST00000383995 104 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 RNU6-413P-201ENST00000384115 107 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AL360182.1-201ENST00000397433 468 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AL024474.1-201ENST00000404655 591 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AL136310.1-201ENST00000404926 654 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AL450338.1-201ENST00000407987 512 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AL356320.2-201ENST00000417263 507 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AC106883.1-201ENST00000418805 562 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 MTND2P9-201ENST00000422293 931 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 ZNF886P-201ENST00000450781 723 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 RFC5P1-201ENST00000454419 874 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AC134050.1-201ENST00000495088 933 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 KLHL2P1-201ENST00000508691 521 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AADACP1-206ENST00000561502 1193 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AL132657.2-201ENST00000564417 358 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AC021749.1-201ENST00000604322 607 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AC106052.1-201ENST00000608029 497 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AC106028.5-201ENST00000610332 395 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 AC006329.2-201ENST00000611491 394 ntBASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
SHROOM1Q2M3G4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC096644.4-201ENST00000563417 2912 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 RNU6-301P-201ENST00000384277 107 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 SKINT1L-201ENST00000401057 817 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 RNA5SP293-201ENST00000410527 113 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 RNU6-712P-201ENST00000410558 100 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 RNA5SP184-201ENST00000411071 108 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 RPL32P35-201ENST00000415214 394 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 RNA5SP310-201ENST00000459084 116 ntBASIC3.33□□□□□ -1.88
SHROOM1Q2M3G4 RPL31P50-201ENST00000471002 296 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms