Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 HSFY3P-201ENST00000444242 1191 ntBASIC2.18□□□□□ -2.06
CLDN12P56749 WASF1P1-201ENST00000447560 1131 ntBASIC2.18□□□□□ -2.06
CLDN12P56749 RPS15AP27-201ENST00000449183 343 ntBASIC2.18□□□□□ -2.06
CLDN12P56749 AP001992.1-205ENST00000462248 379 ntBASIC2.18□□□□□ -2.06
CLDN12P56749 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.18□□□□□ -2.06
CLDN12P56749 SNORA76.2-201ENST00000517095 137 ntBASIC2.18□□□□□ -2.06
CLDN12P56749 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN12P56749 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.18□□□□□ -2.06
CLDN12P56749 CR383656.7-201ENST00000548164 174 ntBASIC2.18□□□□□ -2.06
CLDN12P56749 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.18□□□□□ -2.06
CLDN12P56749 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.18□□□□□ -2.06
CLDN12P56749 AL450270.1-201ENST00000606160 391 ntBASIC2.18□□□□□ -2.06
CLDN12P56749 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CLDN12P56749 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.18□□□□□ -2.06
CLDN12P56749 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CLDN12P56749 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CLDN12P56749 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CLDN12P56749 SNORD46.1-201ENST00000364139 104 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 AC098826.1-201ENST00000433943 471 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 FGF7P5-201ENST00000441829 291 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 AL135938.1-201ENST00000443141 297 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 MTND3P4-201ENST00000453537 303 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 AC108729.2-201ENST00000476543 840 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC2.17□□□□□ -2.06
CLDN12P56749 AC022080.3-201ENST00000544433 482 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN12P56749 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 AC090888.1-201ENST00000561335 1141 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN12P56749 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 AL645944.1-201ENST00000603857 493 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 AC012468.1-201ENST00000604888 430 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.17□□□□□ -2.06
CLDN12P56749 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.17□□□□□ -2.06
CLDN12P56749 AL449363.1-201ENST00000617815 186 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CLDN12P56749 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC2.17□□□□□ -2.06
CLDN12P56749 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
CLDN12P56749 AL022578.1-201ENST00000439330 1433 ntBASIC2.17□□□□□ -2.06
CLDN12P56749 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN12P56749 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN12P56749 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN12P56749 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN12P56749 SNORD62.1-201ENST00000362541 86 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 RNU6-582P-201ENST00000362989 107 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 SNORA67.1-201ENST00000364749 141 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 SNORA9-201ENST00000384215 133 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN12P56749 AL024507.1-201ENST00000412741 274 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 SPA17P1-201ENST00000416656 452 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN12P56749 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN12P56749 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN12P56749 MTCYBP3-201ENST00000445588 1137 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 NAMPTP2-201ENST00000505629 1115 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN12P56749 AC109464.2-201ENST00000510242 943 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN12P56749 RNA5SP82-201ENST00000516707 92 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN12P56749 COX6CP5-201ENST00000527162 228 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 OR4R1P-201ENST00000529879 463 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN12P56749 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN12P56749 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CLDN12P56749 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN12P56749 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.16□□□□□ -2.06
CLDN12P56749 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN12P56749 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.16□□□□□ -2.06
CLDN12P56749 BNIP3P33-201ENST00000598912 569 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AL022067.1-201ENST00000602426 454 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AC007179.3-201ENST00000604976 235 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 TUG1_1.1-201ENST00000610654 145 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AC104307.1-201ENST00000616142 196 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AC073308.1-201ENST00000623696 305 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 AC010872.1-201ENST00000624225 675 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 OR5H6-203ENST00000642105 978 ntBASIC2.16□□□□□ -2.06
CLDN12P56749 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.16□□□□□ -2.06
CLDN12P56749 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
CLDN12P56749 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN12P56749 RN7SKP226-201ENST00000364912 300 ntBASIC2.15□□□□□ -2.07
CLDN12P56749 MIR135A2-201ENST00000384854 100 ntBASIC2.15□□□□□ -2.07
CLDN12P56749 MIR144-201ENST00000384886 86 ntBASIC2.15□□□□□ -2.07
CLDN12P56749 AC016769.3-201ENST00000396562 315 ntBASIC2.15□□□□□ -2.07
CLDN12P56749 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CLDN12P56749 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN12P56749 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN12P56749 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN12P56749 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC2.15□□□□□ -2.07
CLDN12P56749 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.15□□□□□ -2.07
CLDN12P56749 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms