Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 HMGN1P18-201ENST00000457642 277 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC104472.2-201ENST00000469035 601 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.12□□□□□ -1.91
LRRTM2O43300 TMEM251P1-201ENST00000503717 318 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC093767.1-201ENST00000504523 156 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC111000.2-201ENST00000507775 550 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRTM2O43300 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRTM2O43300 AC239860.2-201ENST00000525886 270 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRTM2O43300 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRTM2O43300 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRTM2O43300 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.12□□□□□ -1.91
LRRTM2O43300 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.12□□□□□ -1.91
LRRTM2O43300 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC3.12□□□□□ -1.91
LRRTM2O43300 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRTM2O43300 FAM60BP-201ENST00000578364 658 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC012669.1-201ENST00000603209 283 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRTM2O43300 AC107294.3-201ENST00000609211 526 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC009570.1-201ENST00000609599 745 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC245297.2-201ENST00000610119 565 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC106028.5-201ENST00000610332 395 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 AC007490.1-201ENST00000624321 703 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRTM2O43300 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.12□□□□□ -1.91
LRRTM2O43300 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.12□□□□□ -1.91
LRRTM2O43300 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRTM2O43300 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
LRRTM2O43300 SNORA14A-201ENST00000364773 135 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 FAT1P1-201ENST00000406588 507 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 RNA5SP38-201ENST00000410750 119 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRTM2O43300 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM2O43300 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM2O43300 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRTM2O43300 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM2O43300 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM2O43300 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM2O43300 YWHAZP7-201ENST00000436906 631 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 MTCYBP3-201ENST00000445588 1137 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM2O43300 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.11□□□□□ -1.91
LRRTM2O43300 AC023598.1-201ENST00000472521 361 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM2O43300 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRTM2O43300 IGKV2-26-201ENST00000518305 343 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 OR5AK1P-201ENST00000524837 922 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM2O43300 EEF1B2P4-201ENST00000551398 348 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.11□□□□□ -1.91
LRRTM2O43300 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM2O43300 AP005205.1-201ENST00000563503 508 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AL512347.1-201ENST00000566420 503 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM2O43300 AC006504.3-201ENST00000586818 523 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.11□□□□□ -1.91
LRRTM2O43300 BNIP3P24-201ENST00000593398 557 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 VN1R82P-201ENST00000601481 356 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AL133507.1-201ENST00000605269 557 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AL360219.1-201ENST00000610230 366 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AC025588.4-201ENST00000615802 908 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 Z99129.2-201ENST00000619967 314 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.11□□□□□ -1.91
LRRTM2O43300 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
LRRTM2O43300 AL645937.1-201ENST00000641739 1652 ntBASIC3.11□□□□□ -1.91
LRRTM2O43300 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRTM2O43300 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM2O43300 AC005539.1-201ENST00000443768 1479 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM2O43300 FRG1CP-201ENST00000358464 769 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 RNU6-343P-201ENST00000364709 104 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 U3.42-201ENST00000408746 214 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.1□□□□□ -1.91
LRRTM2O43300 AL953862.1-201ENST00000423016 168 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM2O43300 RPL23AP82-202ENST00000427528 469 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 BX890604.2-201ENST00000427883 474 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 EZH2P1-201ENST00000431167 291 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM2O43300 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.1□□□□□ -1.91
LRRTM2O43300 CENPBD1P1-201ENST00000464061 469 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 S100A11P2-201ENST00000467589 312 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 RN7SL594P-201ENST00000470590 287 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
LRRTM2O43300 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM2O43300 KCTD9P5-201ENST00000504141 1170 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM2O43300 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM2O43300 SNORA64.4-201ENST00000516632 81 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.1□□□□□ -1.91
LRRTM2O43300 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC3.1□□□□□ -1.91
LRRTM2O43300 HSPA8P13-201ENST00000523715 472 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 UBTFL10-201ENST00000528532 562 ntBASIC3.1□□□□□ -1.91
LRRTM2O43300 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
LRRTM2O43300 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms