Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 AC104237.2-201ENST00000612456 443 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AC090971.5-201ENST00000621102 293 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC5.06□□□□□ -1.6
SRGAP3O43295 MARK2P15-201ENST00000432204 2186 ntBASIC5.06□□□□□ -1.6
SRGAP3O43295 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
SRGAP3O43295 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
SRGAP3O43295 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AC068254.2-201ENST00000623938 3577 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.05□□□□□ -1.6
SRGAP3O43295 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRGAP3O43295 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SRGAP3O43295 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.05□□□□□ -1.6
SRGAP3O43295 MIR448-201ENST00000362131 111 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 RNA5SP388-201ENST00000362584 119 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 RNU6-1097P-201ENST00000363586 107 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 RN7SKP227-201ENST00000364445 330 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 RNA5SP515-201ENST00000364570 118 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 SNORA51.6-201ENST00000384151 125 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 Y_RNA.474-201ENST00000384341 102 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 SNORD37.1-201ENST00000390968 65 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AL356421.1-201ENST00000403255 413 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AL356967.1-201ENST00000406305 431 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 RPS7P15-201ENST00000415804 584 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AL117339.2-201ENST00000430475 180 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 RPL36P19-201ENST00000430744 301 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 GPM6BP2-201ENST00000432046 144 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.05□□□□□ -1.6
SRGAP3O43295 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC5.05□□□□□ -1.6
SRGAP3O43295 HSPE1P28-201ENST00000443139 211 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 GPM6BP1-201ENST00000446387 144 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.05□□□□□ -1.6
SRGAP3O43295 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AP1S2P1-201ENST00000457344 379 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AL132838.2-201ENST00000492041 314 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 RNU4-49P-201ENST00000516080 140 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 RNU6-1314P-201ENST00000517139 104 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AC090572.1-201ENST00000519251 160 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AP000907.2-201ENST00000530827 353 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.05□□□□□ -1.6
SRGAP3O43295 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AC093249.1-201ENST00000567049 203 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AC110743.1-201ENST00000584870 478 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC098848.2-201ENST00000588023 330 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.05□□□□□ -1.6
SRGAP3O43295 AC006504.6-201ENST00000590142 199 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 KC877982.1-201ENST00000602313 470 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC113139.1-201ENST00000605049 239 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC116312.1-201ENST00000606841 314 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 MIR6868-201ENST00000611215 58 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 AC243654.2-201ENST00000612843 443 ntBASIC5.05□□□□□ -1.6
SRGAP3O43295 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.05□□□□□ -1.6
SRGAP3O43295 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRGAP3O43295 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SRGAP3O43295 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRGAP3O43295 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SRGAP3O43295 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRGAP3O43295 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRGAP3O43295 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRGAP3O43295 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.04□□□□□ -1.6
SRGAP3O43295 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRGAP3O43295 AL161781.1-201ENST00000354277 403 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
SRGAP3O43295 RNA5SP479-201ENST00000364858 117 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 RNU6-738P-201ENST00000384531 106 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 MIR548P-201ENST00000408336 84 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AC073136.2-201ENST00000417282 849 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 HMGB1P18-201ENST00000438801 619 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AL049734.2-201ENST00000441066 616 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 HSFY6P-201ENST00000445573 403 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AL591623.2-201ENST00000449978 222 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 RPL38P4-201ENST00000502376 214 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.04□□□□□ -1.6
SRGAP3O43295 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.04□□□□□ -1.6
SRGAP3O43295 AC017037.1-201ENST00000508460 471 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.04□□□□□ -1.6
SRGAP3O43295 TMEM248P1-201ENST00000510579 951 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.04□□□□□ -1.6
SRGAP3O43295 RNU6-410P-201ENST00000517006 107 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 MIR2116-201ENST00000517221 80 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 TRMT10BP1-201ENST00000519377 943 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AP003497.1-201ENST00000528472 562 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC5.04□□□□□ -1.6
SRGAP3O43295 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.04□□□□□ -1.6
SRGAP3O43295 MIR3160-1-201ENST00000577972 85 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.04□□□□□ -1.6
SRGAP3O43295 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.04□□□□□ -1.6
SRGAP3O43295 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.04□□□□□ -1.6
SRGAP3O43295 AL355472.4-201ENST00000610233 626 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AC040896.1-201ENST00000613819 479 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.04□□□□□ -1.6
SRGAP3O43295 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SRGAP3O43295 AC006020.1-201ENST00000420179 1854 ntBASIC5.04□□□□□ -1.6
SRGAP3O43295 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.04□□□□□ -1.6
SRGAP3O43295 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.04□□□□□ -1.6
SRGAP3O43295 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms