Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 MTND2P17-201ENST00000550281 688 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC074050.1-201ENST00000563247 211 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC023824.2-201ENST00000566185 400 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC145207.9-201ENST00000623802 325 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC068880.5-201ENST00000624331 290 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC098679.5-201ENST00000624394 571 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 AC243829.7-201ENST00000633081 225 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 MTND5P10-201ENST00000603719 1809 ntBASIC1.12□□□□□ -2.23
LINC01549A6NIU2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
LINC01549A6NIU2 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 RNU1-62P-201ENST00000362599 164 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 SNORD46.1-201ENST00000364139 104 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 MIR128-1-201ENST00000384921 82 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 MIR517C-201ENST00000385103 95 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC074117.2-201ENST00000417130 397 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AL445669.1-201ENST00000426743 755 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC004866.2-201ENST00000438285 481 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AL353705.4-201ENST00000449661 238 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 ANKRD26P4-201ENST00000455755 950 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC092798.1-201ENST00000458542 409 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 snoU13.24-201ENST00000458998 104 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 RPL31P50-201ENST00000471002 296 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC055731.1-201ENST00000474387 401 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC106872.3-201ENST00000495104 446 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC026801.1-201ENST00000497178 464 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AP004371.1-201ENST00000525240 214 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AL160236.1-201ENST00000556317 195 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AL355816.1-201ENST00000607951 118 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC009570.1-201ENST00000609599 745 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC003001.2-201ENST00000616294 831 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 U73479.1-201ENST00000618062 168 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC139769.3-201ENST00000618383 175 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC006386.2-201ENST00000624491 75 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC012005.1-201ENST00000624575 75 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 AC116563.2-201ENST00000624751 535 ntBASIC1.11□□□□□ -2.23
LINC01549A6NIU2 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
LINC01549A6NIU2 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 MIR320A-201ENST00000385302 82 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AL079342.1-201ENST00000401460 267 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AL121972.1-201ENST00000402023 252 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AL034374.1-201ENST00000406329 351 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 RNU6-920P-201ENST00000410926 92 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 USP9YP6-201ENST00000413550 854 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 RPL7P44-201ENST00000424827 742 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 RPL31P20-201ENST00000449593 360 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AC022447.3-201ENST00000506865 495 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 ARL2BPP2-201ENST00000550907 489 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 BX248123.2-201ENST00000606318 124 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 BX323046.1-201ENST00000610145 535 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 MIR7974-201ENST00000615835 79 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 AL136360.1-201ENST00000503377 1900 ntBASIC1.1□□□□□ -2.23
LINC01549A6NIU2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.1□□□□□ -2.23
LINC01549A6NIU2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.09□□□□□ -2.23
LINC01549A6NIU2 AC004520.1-201ENST00000608362 1413 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms