Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AP005435.3-201ENST00000531260 3198 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 RNA5SP391-201ENST00000363456 119 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 Y_RNA.158-201ENST00000363651 101 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 RNU6-82P-201ENST00000363970 107 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 RN7SKP224-201ENST00000364140 325 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 Y_RNA.212-201ENST00000364177 102 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 SNORD82-201ENST00000365530 70 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 SNORA5.1-201ENST00000384275 131 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 Y_RNA.482-201ENST00000384377 111 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 RNU6-505P-201ENST00000384427 107 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 MT-TG-201ENST00000387429 68 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL139397.2-201ENST00000404529 772 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 RN7SKP16-201ENST00000410180 299 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 Y_RNA.618-201ENST00000410949 107 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC005019.1-201ENST00000436455 431 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL035666.1-201ENST00000446195 348 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC020550.1-201ENST00000447385 163 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 MTCO3P10-201ENST00000455912 772 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 RNU7-59P-201ENST00000459101 61 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC023424.1-201ENST00000496058 459 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL137161.1-201ENST00000532231 390 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 FKBP1BP1-201ENST00000553366 325 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC008269.2-201ENST00000561915 1105 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 MIR4429-201ENST00000580105 73 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL670379.11-201ENST00000604059 253 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL670379.10-201ENST00000604330 253 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL670379.12-201ENST00000605291 253 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL670379.9-201ENST00000605428 253 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AL591034.3-201ENST00000605511 685 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC005014.2-201ENST00000607795 599 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 U4.1-201ENST00000620349 87 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 MIR492-201ENST00000638676 116 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC093849.1-201ENST00000563631 2209 ntBASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
RTCBQ9Y3I0 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
RTCBQ9Y3I0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RTCBQ9Y3I0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AL445437.1-201ENST00000623157 3087 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 Y_RNA.149-201ENST00000363558 117 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 MIR1302-3-201ENST00000408128 138 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 RNU6-954P-201ENST00000411355 107 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AL031584.1-201ENST00000447169 754 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AL354710.1-201ENST00000453641 246 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 SNORD121B-201ENST00000458838 81 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC004801.2-202ENST00000463559 283 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 PARP4P3-201ENST00000510265 317 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 RNU6-256P-201ENST00000516747 97 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 HMGB1P19-201ENST00000517578 577 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 OR8R1P-201ENST00000543943 764 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 MIR3672-201ENST00000584290 82 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.83□□□□□ -1.48
RTCBQ9Y3I0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AC097461.1-201ENST00000568928 2821 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 RNU6-1243P-201ENST00000364028 107 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AL022722.2-201ENST00000402519 180 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 VDAC1P9-201ENST00000412766 841 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AC114482.1-201ENST00000418010 247 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 HSFY6P-201ENST00000445573 403 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 AC034236.1-201ENST00000469891 373 ntBASIC5.82□□□□□ -1.48
RTCBQ9Y3I0 RPL7P43-201ENST00000478876 753 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms