Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 AP000936.2-201ENST00000447151 681 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 AL162389.1-201ENST00000449233 177 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 NANOGP10-201ENST00000453325 895 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 AC108860.1-201ENST00000484521 383 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 ARL2BPP4-201ENST00000506854 471 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 SNORA31.22-201ENST00000517204 135 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 ERHP1-201ENST00000523006 310 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 MIR3146-201ENST00000580367 79 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 AC006116.10-201ENST00000591836 581 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 BDH2P1-201ENST00000602288 736 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 AC004067.1-201ENST00000608733 700 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 AC131902.3-201ENST00000611767 581 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 AL139089.1-201ENST00000620372 975 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
USP35Q9P2H5 MTCO1P12-201ENST00000414273 1543 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 Z82217.1-201ENST00000625157 8149 ntBASIC5.42□□□□□ -1.54
USP35Q9P2H5 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
USP35Q9P2H5 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP35Q9P2H5 AC095050.2-201ENST00000510748 1458 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 AL672296.1-201ENST00000427780 2158 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP35Q9P2H5 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 MIR183-201ENST00000384958 110 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 SNORA40.3-201ENST00000390964 122 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 Z92545.1-201ENST00000411782 234 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 RPS29P4-201ENST00000414733 161 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 TIMM9P1-201ENST00000436122 256 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 AF228730.2-201ENST00000438784 848 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 USP9YP29-201ENST00000445112 563 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 RN7SL585P-201ENST00000470538 280 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 RN7SKP289-201ENST00000517244 295 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 PHBP17-201ENST00000528576 541 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 CYCSP30-201ENST00000546447 172 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 ZNF192P1-203ENST00000565888 810 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 MIR3921-201ENST00000577308 85 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 MIR3682-201ENST00000581338 84 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 MIR4298-201ENST00000584380 73 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP35Q9P2H5 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 AC008121.2-201ENST00000614647 523 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 AP001506.1-201ENST00000615444 211 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 U6.105-201ENST00000637379 88 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP35Q9P2H5 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
USP35Q9P2H5 SDAD1P2-201ENST00000441308 2028 ntBASIC5.41□□□□□ -1.54
USP35Q9P2H5 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
USP35Q9P2H5 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
USP35Q9P2H5 HSP90AA4P-202ENST00000506915 2228 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 TEX21P-201ENST00000447107 1476 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP35Q9P2H5 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP35Q9P2H5 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP35Q9P2H5 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP35Q9P2H5 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
USP35Q9P2H5 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 MIR3074-201ENST00000384885 81 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 RNA5SP129-201ENST00000410276 118 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 RPS3AP3-201ENST00000411933 242 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 MTCO2P34-201ENST00000421994 607 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 RPL27AP8-201ENST00000424277 446 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 AL353706.1-201ENST00000436728 494 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 MTND6P13-201ENST00000443510 523 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
USP35Q9P2H5 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 IGKV2D-23-201ENST00000518179 286 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 DEFB108A-201ENST00000530110 222 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 AP002963.1-201ENST00000530590 184 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 AP003122.4-201ENST00000530980 758 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 AP002453.2-201ENST00000533503 320 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC5.4□□□□□ -1.54
USP35Q9P2H5 RPL23AP97-201ENST00000568955 471 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 MIR5684-201ENST00000585074 65 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 MIR3922-201ENST00000585192 84 ntBASIC5.4□□□□□ -1.54
USP35Q9P2H5 AC022146.1-201ENST00000595307 847 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms