Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC002064.3-201ENST00000623448 346 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 AC012321.1-201ENST00000561622 1588 ntBASIC2.51□□□□□ -2.01
CLN6Q9NWW5 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.51□□□□□ -2.01
CLN6Q9NWW5 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 FRG1BP-201ENST00000278882 761 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 RNU6-216P-201ENST00000363282 104 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 SNORD56.5-201ENST00000364281 72 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 CCDC58P2-201ENST00000417131 366 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AL158156.1-201ENST00000422509 473 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 LSM1P1-201ENST00000438629 273 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 PTGES3P1-201ENST00000439531 483 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC234775.1-201ENST00000454247 670 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 RN7SL504P-201ENST00000494496 287 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 RPL30P5-201ENST00000494923 336 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC147055.4-201ENST00000504399 745 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC098799.2-201ENST00000509466 868 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC022483.1-201ENST00000514020 567 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 RNU6-798P-201ENST00000516912 103 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 HSPE1P3-201ENST00000559254 309 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC090695.1-201ENST00000561269 1222 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 MIR3158-1-201ENST00000583596 81 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC008507.2-201ENST00000588402 1176 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC060766.3-201ENST00000591442 263 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AL390838.2-201ENST00000602394 274 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AL020997.2-201ENST00000602607 184 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AP000787.2-201ENST00000604432 568 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC004853.1-201ENST00000604902 698 ntBASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CLN6Q9NWW5 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AL450338.1-201ENST00000407987 512 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 RNU2-42P-201ENST00000410697 113 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AL356320.2-201ENST00000417263 507 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC022018.1-201ENST00000430685 241 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 RPL26P6-201ENST00000440913 438 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 RN7SL807P-201ENST00000470923 297 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 SRIP1-201ENST00000489235 288 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC090453.1-201ENST00000495560 436 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 TMEM251P1-201ENST00000503717 318 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC117522.3-201ENST00000507974 584 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC091826.1-201ENST00000514065 313 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC009812.2-201ENST00000517657 457 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC103783.1-201ENST00000520506 373 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 CCNG2P1-201ENST00000549521 1000 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 RPL23AP78-201ENST00000599928 470 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 RPL21P136-201ENST00000605378 396 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC025588.4-201ENST00000615802 908 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC120349.2-201ENST00000625002 298 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 MIR3651-201ENST00000630427 90 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.49□□□□□ -2.01
CLN6Q9NWW5 AP000526.1-201ENST00000603308 1388 ntBASIC2.49□□□□□ -2.01
CLN6Q9NWW5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 RNU5A-1-201ENST00000362698 116 ntBASIC2.48□□□□□ -2.01
CLN6Q9NWW5 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 Y_RNA.578-201ENST00000390903 88 ntBASIC2.48□□□□□ -2.01
CLN6Q9NWW5 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 ARL4AP4-201ENST00000434170 518 ntBASIC2.48□□□□□ -2.01
CLN6Q9NWW5 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.48□□□□□ -2.01
CLN6Q9NWW5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 161.7 ms