Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 AL049838.1-201ENST00000563647 981 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC034105.3-201ENST00000565294 442 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC106785.1-201ENST00000565935 262 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC060771.1-201ENST00000582031 164 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC008507.1-201ENST00000587506 734 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 VN1R92P-201ENST00000598511 928 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 BNIP3P39-201ENST00000601077 554 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 AL139344.1-201ENST00000605228 195 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AL136363.1-201ENST00000605349 337 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC004832.5-201ENST00000608677 401 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC009974.1-201ENST00000608881 455 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 TUG1_2.1-201ENST00000614234 87 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 SDR42E1P2-201ENST00000614861 481 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 AC010133.1-201ENST00000615809 842 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 AP001002.2-201ENST00000625137 386 ntBASIC3.17□□□□□ -1.9
PTP4A1Q93096 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
PTP4A1Q93096 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PTP4A1Q93096 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTP4A1Q93096 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTP4A1Q93096 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTP4A1Q93096 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 MIR1305-201ENST00000408300 86 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 MIR1289-1-201ENST00000408836 144 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 RNU6-757P-201ENST00000410334 100 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AL035407.1-201ENST00000429211 571 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 SAR1AP4-201ENST00000429225 591 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AL353705.1-201ENST00000433468 480 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 RPL23AP58-201ENST00000440453 469 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 CR769776.1-201ENST00000441254 787 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 RPL21P133-201ENST00000443666 476 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AP000542.1-201ENST00000448473 371 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 RPS4XP2-201ENST00000458402 793 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 RPS20P22-201ENST00000473700 357 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC021205.2-201ENST00000480069 347 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC026402.1-201ENST00000513642 170 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC007991.1-201ENST00000522680 631 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AL133271.1-201ENST00000538229 291 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 AF038458.1-201ENST00000588406 262 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC004908.2-201ENST00000609090 574 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC110801.1-201ENST00000623590 212 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC068787.1-201ENST00000623908 691 ntBASIC3.16□□□□□ -1.9
PTP4A1Q93096 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PTP4A1Q93096 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.16□□□□□ -1.9
PTP4A1Q93096 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
PTP4A1Q93096 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
PTP4A1Q93096 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
PTP4A1Q93096 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
PTP4A1Q93096 RNU6-777P-201ENST00000364265 104 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
PTP4A1Q93096 ANAPC10P1-201ENST00000395991 556 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
PTP4A1Q93096 AL109755.1-201ENST00000401791 649 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 RNA5SP31-201ENST00000411144 127 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AL513331.1-201ENST00000411908 397 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 UBE2FP1-201ENST00000416536 447 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AL645937.1-202ENST00000421799 937 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC3.15□□□□□ -1.91
PTP4A1Q93096 AC007389.2-201ENST00000434630 306 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 FGF7P5-201ENST00000441829 291 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 PIGFP3-201ENST00000441918 722 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 NOTCH2P1-201ENST00000443481 624 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.15□□□□□ -1.91
PTP4A1Q93096 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.15□□□□□ -1.91
PTP4A1Q93096 ANKRD26P4-201ENST00000455755 950 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.15□□□□□ -1.91
PTP4A1Q93096 AP1S2P1-201ENST00000457344 379 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AC023598.1-201ENST00000472521 361 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AC093663.1-201ENST00000497190 394 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AC135721.1-201ENST00000497954 479 ntBASIC3.15□□□□□ -1.91
PTP4A1Q93096 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.15□□□□□ -1.91
PTP4A1Q93096 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.15□□□□□ -1.91
PTP4A1Q93096 RAC1P5-201ENST00000512182 576 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms