Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AC025281.1-201ENST00000567026 265 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AC133794.1-201ENST00000602731 914 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 AL355810.1-201ENST00000614629 552 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LMX1AQ8TE12 SGO1P2-201ENST00000429458 1589 ntBASIC2.27□□□□□ -2.05
LMX1AQ8TE12 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 MTND5P6-201ENST00000422338 1798 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 CUL1P1-201ENST00000509510 2425 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 RNU6-444P-201ENST00000383988 108 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 RNU6-441P-201ENST00000384545 106 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 OR51A3P-201ENST00000413596 924 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC096632.1-201ENST00000427395 310 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 RPS15AP28-201ENST00000435088 386 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 RPL36AP6-201ENST00000435770 321 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC092170.1-201ENST00000440211 356 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC096638.1-201ENST00000444678 216 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AL929288.2-201ENST00000446368 407 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC004022.1-201ENST00000447766 1066 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 MTND2P30-201ENST00000456663 382 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 RNU6-237P-201ENST00000515985 71 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 IGJP1-201ENST00000522682 475 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 OSBPL9P3-201ENST00000534523 595 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 OR8K4P-201ENST00000534608 872 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AADACP1-206ENST00000561502 1193 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC105137.2-201ENST00000569073 466 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC009163.5-201ENST00000575421 637 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 COX6CP3-201ENST00000580869 223 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AL158827.2-201ENST00000602494 330 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 XIAPP1-201ENST00000603162 600 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC067747.1-201ENST00000608026 250 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC013468.1-201ENST00000608680 598 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC097460.3-201ENST00000623099 442 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AL691447.3-201ENST00000635020 330 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC097714.1-201ENST00000511272 1647 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 AC006378.2-201ENST00000623178 2476 ntBASIC2.26□□□□□ -2.05
LMX1AQ8TE12 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LMX1AQ8TE12 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 RNU6-619P-201ENST00000365146 108 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 RNU4-78P-201ENST00000410940 126 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AL445183.3-201ENST00000414168 502 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC099677.1-201ENST00000420575 175 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AL606495.1-201ENST00000422100 813 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC233981.1-201ENST00000423224 461 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AL512661.1-201ENST00000434586 1253 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 GTF2IP12-201ENST00000456547 356 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 RPL30P9-201ENST00000465586 330 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 MTND3P24-201ENST00000506306 329 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 MTND5P4-201ENST00000514978 288 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC004486.1-201ENST00000546846 233 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 MIR4524B-201ENST00000581569 115 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 VN1R78P-201ENST00000597393 564 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AL020997.3-201ENST00000602843 359 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC004696.1-201ENST00000614345 607 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AL138880.2-201ENST00000616214 239 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC132825.7-201ENST00000638744 335 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC244517.1-201ENST00000606030 2086 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 AC104454.1-201ENST00000421341 1401 ntBASIC2.25□□□□□ -2.05
LMX1AQ8TE12 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC2.25□□□□□ -2.05
LMX1AQ8TE12 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.24□□□□□ -2.05
LMX1AQ8TE12 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LMX1AQ8TE12 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms