Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN9P43378 AC017037.2-201ENST00000513850 890 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 RNU6-1095P-201ENST00000516148 108 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 RNU6-528P-201ENST00000516926 100 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN9P43378 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.83□□□□□ -1.8
PTPN9P43378 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.83□□□□□ -1.8
PTPN9P43378 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN9P43378 MIR4528-201ENST00000577763 90 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 MIR3682-201ENST00000581338 84 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 ZNF415P1-201ENST00000582279 1166 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AC093227.2-201ENST00000589357 285 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AL031176.1-201ENST00000604554 466 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AC092354.2-201ENST00000607786 514 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AC013562.2-201ENST00000611632 603 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AL589743.7-201ENST00000612637 233 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AC009159.1-201ENST00000618386 642 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 AL732618.1-201ENST00000623251 301 ntBASIC3.83□□□□□ -1.8
PTPN9P43378 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
PTPN9P43378 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
PTPN9P43378 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.83□□□□□ -1.8
PTPN9P43378 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN9P43378 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN9P43378 AL365440.1-201ENST00000436135 2167 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 MTND5P29-201ENST00000458676 1807 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN9P43378 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN9P43378 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN9P43378 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
PTPN9P43378 AL445189.1-201ENST00000405722 338 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 RNU6-712P-201ENST00000410558 100 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 RN7SKP159-201ENST00000410657 292 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AC078974.1-201ENST00000411597 223 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN9P43378 OR1AA1P-201ENST00000419597 916 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AC092832.1-201ENST00000422934 400 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN9P43378 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN9P43378 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN9P43378 AL031667.1-201ENST00000440222 725 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AL022238.1-201ENST00000442557 355 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 NOTCH2P1-201ENST00000443481 624 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN9P43378 TPT1P7-201ENST00000458300 517 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AC078817.1-201ENST00000492623 435 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN9P43378 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN9P43378 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN9P43378 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC3.82□□□□□ -1.8
PTPN9P43378 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN9P43378 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN9P43378 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN9P43378 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.82□□□□□ -1.8
PTPN9P43378 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN9P43378 AC090578.1-201ENST00000604955 591 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 RNU6-87P-201ENST00000607561 108 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AC103710.1-201ENST00000610003 901 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AC018755.4-201ENST00000619715 454 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 U7.8-201ENST00000619968 63 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 C2orf27A-204ENST00000623058 969 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AC084035.1-201ENST00000634543 607 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 AL732372.2-225ENST00000642124 456 ntBASIC3.82□□□□□ -1.8
PTPN9P43378 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN9P43378 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.82□□□□□ -1.8
PTPN9P43378 AC093908.1-201ENST00000623125 8092 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 FARSBP1-201ENST00000435808 1778 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.81□□□□□ -1.8
PTPN9P43378 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN9P43378 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN9P43378 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN9P43378 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN9P43378 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
PTPN9P43378 RPS4XP5-202ENST00000449995 1334 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 RNU6-1155P-201ENST00000363554 107 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
PTPN9P43378 Y_RNA.548-201ENST00000384656 105 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
PTPN9P43378 FCF1P10-201ENST00000407590 479 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN9P43378 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN9P43378 EI24P1-201ENST00000416584 867 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 CCDC58P2-201ENST00000417131 366 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 AL137014.1-201ENST00000420490 1226 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 AC245054.1-201ENST00000420944 258 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 BEND7P1-201ENST00000422058 457 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN9P43378 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN9P43378 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN9P43378 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.81□□□□□ -1.8
PTPN9P43378 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN9P43378 AC244505.5-201ENST00000443639 207 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 AC010655.1-201ENST00000449336 292 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.81□□□□□ -1.8
PTPN9P43378 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.81□□□□□ -1.8
PTPN9P43378 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN9P43378 AP000873.1-201ENST00000463987 400 ntBASIC3.81□□□□□ -1.8
PTPN9P43378 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.81□□□□□ -1.8
PTPN9P43378 RPL7P23-201ENST00000493874 747 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms