Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AL627309.6-201ENST00000606857 840 ntBASIC1.68□□□□□ -2.14
HTTP42858 STMN1P1-201ENST00000617809 440 ntBASIC1.68□□□□□ -2.14
HTTP42858 MIR6788-201ENST00000618842 66 ntBASIC1.68□□□□□ -2.14
HTTP42858 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
HTTP42858 AC073348.1-201ENST00000623002 331 ntBASIC1.68□□□□□ -2.14
HTTP42858 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HTTP42858 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
HTTP42858 DNAJC19P6-201ENST00000401853 280 ntBASIC1.67□□□□□ -2.14
HTTP42858 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.67□□□□□ -2.14
HTTP42858 AC234781.2-201ENST00000426370 994 ntBASIC1.67□□□□□ -2.14
HTTP42858 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.67□□□□□ -2.14
HTTP42858 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
HTTP42858 NIFKP8-201ENST00000560500 874 ntBASIC1.67□□□□□ -2.14
HTTP42858 MIR3670-2-201ENST00000582974 65 ntBASIC1.67□□□□□ -2.14
HTTP42858 MIR3670-1-201ENST00000584160 65 ntBASIC1.67□□□□□ -2.14
HTTP42858 MIR3670-3-201ENST00000584855 65 ntBASIC1.67□□□□□ -2.14
HTTP42858 MIR3670-4-201ENST00000612260 65 ntBASIC1.67□□□□□ -2.14
HTTP42858 USP9YP27-201ENST00000418455 438 ntBASIC1.67□□□□□ -2.14
HTTP42858 CALM1P1-201ENST00000442082 433 ntBASIC1.67□□□□□ -2.14
HTTP42858 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.67□□□□□ -2.14
HTTP42858 AC068944.2-201ENST00000610373 403 ntBASIC1.67□□□□□ -2.14
HTTP42858 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC1.67□□□□□ -2.14
HTTP42858 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HTTP42858 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
HTTP42858 RPL19P1-201ENST00000411635 428 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.66□□□□□ -2.14
HTTP42858 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.66□□□□□ -2.14
HTTP42858 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.66□□□□□ -2.14
HTTP42858 RNA5SP385-201ENST00000515947 110 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HTTP42858 AC087854.1-201ENST00000519706 414 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC087373.1-201ENST00000524920 491 ntBASIC1.66□□□□□ -2.14
HTTP42858 TRAV28-201ENST00000557548 323 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC116158.1-201ENST00000560231 2129 ntBASIC1.66□□□□□ -2.14
HTTP42858 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC096720.1-201ENST00000604441 183 ntBASIC1.66□□□□□ -2.14
HTTP42858 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC1.66□□□□□ -2.14
HTTP42858 AL513185.2-201ENST00000425543 193 ntBASIC1.66□□□□□ -2.14
HTTP42858 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.66□□□□□ -2.14
HTTP42858 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC1.66□□□□□ -2.14
HTTP42858 RPS3AP22-201ENST00000488297 769 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC021146.7-201ENST00000509604 775 ntBASIC1.66□□□□□ -2.14
HTTP42858 AP000907.2-201ENST00000530827 353 ntBASIC1.66□□□□□ -2.14
HTTP42858 MIR3660-201ENST00000584845 100 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC1.66□□□□□ -2.14
HTTP42858 AC012078.1-201ENST00000405035 1646 ntBASIC1.66□□□□□ -2.14
HTTP42858 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.66□□□□□ -2.14
HTTP42858 SNORA67.6-201ENST00000391093 99 ntBASIC1.66□□□□□ -2.14
HTTP42858 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.66□□□□□ -2.14
HTTP42858 AL022400.1-201ENST00000423946 935 ntBASIC1.66□□□□□ -2.14
HTTP42858 COX6CP14-201ENST00000469580 174 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC011979.1-201ENST00000472300 483 ntBASIC1.66□□□□□ -2.14
HTTP42858 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HTTP42858 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC1.66□□□□□ -2.14
HTTP42858 AL359273.1-201ENST00000510918 627 ntBASIC1.66□□□□□ -2.14
HTTP42858 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
HTTP42858 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.66□□□□□ -2.14
HTTP42858 BNIP3P4-201ENST00000604946 565 ntBASIC1.66□□□□□ -2.14
HTTP42858 AC025016.1-201ENST00000616746 682 ntBASIC1.66□□□□□ -2.14
HTTP42858 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.66□□□□□ -2.14
HTTP42858 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
HTTP42858 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.65□□□□□ -2.14
HTTP42858 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
HTTP42858 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.65□□□□□ -2.14
HTTP42858 AL138785.1-201ENST00000425821 331 ntBASIC1.65□□□□□ -2.14
HTTP42858 FTH1P12-201ENST00000432137 551 ntBASIC1.65□□□□□ -2.14
HTTP42858 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.65□□□□□ -2.14
HTTP42858 MIR3186-201ENST00000577404 85 ntBASIC1.65□□□□□ -2.14
HTTP42858 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
HTTP42858 AL512283.1-201ENST00000606756 1384 ntBASIC1.65□□□□□ -2.15
HTTP42858 RNU1-139P-201ENST00000391307 165 ntBASIC1.65□□□□□ -2.15
HTTP42858 AC023128.2-201ENST00000420880 1223 ntBASIC1.65□□□□□ -2.15
HTTP42858 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.65□□□□□ -2.15
HTTP42858 ARL2BPP4-201ENST00000506854 471 ntBASIC1.65□□□□□ -2.15
HTTP42858 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC1.65□□□□□ -2.15
HTTP42858 AL627230.5-201ENST00000619807 58 ntBASIC1.65□□□□□ -2.15
HTTP42858 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HTTP42858 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
HTTP42858 RNA5SP181-201ENST00000410246 98 ntBASIC1.64□□□□□ -2.15
HTTP42858 RAD23BP2-201ENST00000416003 1207 ntBASIC1.64□□□□□ -2.15
HTTP42858 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.64□□□□□ -2.15
HTTP42858 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.64□□□□□ -2.15
HTTP42858 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC1.64□□□□□ -2.15
HTTP42858 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.64□□□□□ -2.15
HTTP42858 AC093331.1-201ENST00000521474 169 ntBASIC1.64□□□□□ -2.15
HTTP42858 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC1.64□□□□□ -2.15
HTTP42858 AL592494.3-201ENST00000609485 464 ntBASIC1.64□□□□□ -2.15
HTTP42858 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC1.64□□□□□ -2.15
HTTP42858 RNU4-41P-201ENST00000364426 143 ntBASIC1.64□□□□□ -2.15
HTTP42858 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
HTTP42858 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.64□□□□□ -2.15
HTTP42858 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.64□□□□□ -2.15
HTTP42858 MIR373-201ENST00000362273 69 ntBASIC1.64□□□□□ -2.15
HTTP42858 SNORD6-201ENST00000365444 73 ntBASIC1.64□□□□□ -2.15
HTTP42858 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.64□□□□□ -2.15
HTTP42858 AC083806.3-201ENST00000614016 455 ntBASIC1.64□□□□□ -2.15
HTTP42858 AC008121.3-201ENST00000618726 433 ntBASIC1.64□□□□□ -2.15
HTTP42858 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
HTTP42858 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
HTTP42858 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms