Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB3O75112 MTND4P28-201ENST00000426217 387 ntBASIC3.59□□□□□ -1.83
LDB3O75112 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB3O75112 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB3O75112 RPL7P36-201ENST00000444633 681 ntBASIC3.59□□□□□ -1.83
LDB3O75112 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB3O75112 DPPA3P1-201ENST00000448050 469 ntBASIC3.59□□□□□ -1.83
LDB3O75112 MTND5P20-201ENST00000448677 143 ntBASIC3.59□□□□□ -1.83
LDB3O75112 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB3O75112 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.59□□□□□ -1.83
LDB3O75112 AL121877.1-201ENST00000453704 622 ntBASIC3.59□□□□□ -1.83
LDB3O75112 OFD1P4Y-201ENST00000455273 1179 ntBASIC3.59□□□□□ -1.83
LDB3O75112 snoU13.3-201ENST00000459441 104 ntBASIC3.59□□□□□ -1.83
LDB3O75112 AP001992.1-205ENST00000462248 379 ntBASIC3.59□□□□□ -1.83
LDB3O75112 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB3O75112 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB3O75112 FCF1P3-201ENST00000496394 590 ntBASIC3.59□□□□□ -1.83
LDB3O75112 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB3O75112 AC019235.1-201ENST00000503847 207 ntBASIC3.59□□□□□ -1.83
LDB3O75112 ARL4AP2-201ENST00000507378 601 ntBASIC3.59□□□□□ -1.83
LDB3O75112 RAC1P2-201ENST00000511164 579 ntBASIC3.59□□□□□ -1.83
LDB3O75112 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB3O75112 AC093853.1-201ENST00000515689 483 ntBASIC3.59□□□□□ -1.83
LDB3O75112 RNA5SP208-201ENST00000516156 78 ntBASIC3.59□□□□□ -1.83
LDB3O75112 Y_RNA.702-201ENST00000516843 96 ntBASIC3.59□□□□□ -1.83
LDB3O75112 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.59□□□□□ -1.83
LDB3O75112 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB3O75112 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.59□□□□□ -1.83
LDB3O75112 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB3O75112 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.59□□□□□ -1.83
LDB3O75112 CYCSP30-201ENST00000546447 172 ntBASIC3.59□□□□□ -1.83
LDB3O75112 AC090877.1-201ENST00000561418 344 ntBASIC3.59□□□□□ -1.83
LDB3O75112 HSPE1P5-201ENST00000561489 272 ntBASIC3.59□□□□□ -1.83
LDB3O75112 AC137800.2-201ENST00000574375 120 ntBASIC3.59□□□□□ -1.83
LDB3O75112 MIR5685-201ENST00000579080 79 ntBASIC3.59□□□□□ -1.83
LDB3O75112 MIR4719-201ENST00000585233 84 ntBASIC3.59□□□□□ -1.83
LDB3O75112 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.59□□□□□ -1.83
LDB3O75112 AC006504.3-201ENST00000586818 523 ntBASIC3.59□□□□□ -1.83
LDB3O75112 AL669831.4-202ENST00000590817 238 ntBASIC3.59□□□□□ -1.83
LDB3O75112 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB3O75112 AC104458.1-201ENST00000608243 463 ntBASIC3.59□□□□□ -1.83
LDB3O75112 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB3O75112 AC091304.9-201ENST00000612091 226 ntBASIC3.59□□□□□ -1.83
LDB3O75112 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
LDB3O75112 AC103858.2-201ENST00000621471 543 ntBASIC3.59□□□□□ -1.83
LDB3O75112 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.59□□□□□ -1.83
LDB3O75112 AC018529.3-201ENST00000624212 2254 ntBASIC3.59□□□□□ -1.84
LDB3O75112 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
LDB3O75112 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.59□□□□□ -1.84
LDB3O75112 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB3O75112 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB3O75112 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB3O75112 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 Y_RNA.38-201ENST00000362617 102 ntBASIC3.58□□□□□ -1.84
LDB3O75112 RNU6-343P-201ENST00000364709 104 ntBASIC3.58□□□□□ -1.84
LDB3O75112 Y_RNA.409-201ENST00000383990 98 ntBASIC3.58□□□□□ -1.84
LDB3O75112 RNU6-533P-201ENST00000384144 107 ntBASIC3.58□□□□□ -1.84
LDB3O75112 RNU6-769P-201ENST00000384407 104 ntBASIC3.58□□□□□ -1.84
LDB3O75112 Y_RNA.493-201ENST00000384422 102 ntBASIC3.58□□□□□ -1.84
LDB3O75112 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
LDB3O75112 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB3O75112 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.58□□□□□ -1.84
LDB3O75112 AL513174.1-201ENST00000423182 629 ntBASIC3.58□□□□□ -1.84
LDB3O75112 USP9YP36-201ENST00000424581 829 ntBASIC3.58□□□□□ -1.84
LDB3O75112 ELOCP14-201ENST00000428070 331 ntBASIC3.58□□□□□ -1.84
LDB3O75112 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB3O75112 RSU1P2-202ENST00000437884 485 ntBASIC3.58□□□□□ -1.84
LDB3O75112 ELOCP7-201ENST00000439968 331 ntBASIC3.58□□□□□ -1.84
LDB3O75112 SDCBPP1-201ENST00000440192 890 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB3O75112 MTND6P13-201ENST00000443510 523 ntBASIC3.58□□□□□ -1.84
LDB3O75112 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB3O75112 AL500522.2-201ENST00000448562 343 ntBASIC3.58□□□□□ -1.84
LDB3O75112 ACTR3P3-201ENST00000480448 893 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
LDB3O75112 AP001025.2-201ENST00000490908 477 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AC146944.2-203ENST00000502493 354 ntBASIC3.58□□□□□ -1.84
LDB3O75112 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
LDB3O75112 TXNP6-201ENST00000510190 310 ntBASIC3.58□□□□□ -1.84
LDB3O75112 VWA8P1-201ENST00000510889 176 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB3O75112 AC139495.1-202ENST00000513164 354 ntBASIC3.58□□□□□ -1.84
LDB3O75112 Y_RNA.704-201ENST00000516851 102 ntBASIC3.58□□□□□ -1.84
LDB3O75112 MTCO2P4-201ENST00000517968 247 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AP001646.1-201ENST00000527936 915 ntBASIC3.58□□□□□ -1.84
LDB3O75112 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB3O75112 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.58□□□□□ -1.84
LDB3O75112 AC104383.1-201ENST00000530297 370 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AC022878.1-201ENST00000530684 149 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB3O75112 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.58□□□□□ -1.84
LDB3O75112 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB3O75112 AC106785.1-201ENST00000565935 262 ntBASIC3.58□□□□□ -1.84
LDB3O75112 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.58□□□□□ -1.84
LDB3O75112 AC005730.3-201ENST00000583067 366 ntBASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms