Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.85□□□□□ -1.79
SMAD6O43541 RPS3AP14-201ENST00000483907 780 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 NIPA2P2-201ENST00000496376 1083 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 RPL7P47-201ENST00000497299 556 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 MTCYBP18-201ENST00000501056 747 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.85□□□□□ -1.79
SMAD6O43541 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.85□□□□□ -1.79
SMAD6O43541 AC021678.1-201ENST00000505195 936 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 ARL4AP2-201ENST00000507378 601 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 MTND5P4-201ENST00000514978 288 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.85□□□□□ -1.79
SMAD6O43541 RNA5SP216-201ENST00000516111 123 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 RNU6-358P-201ENST00000516564 75 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 IGKV2-23-201ENST00000518729 323 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 HIGD1AP6-201ENST00000521833 279 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AC013828.2-201ENST00000532487 235 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.85□□□□□ -1.79
SMAD6O43541 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.85□□□□□ -1.79
SMAD6O43541 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.85□□□□□ -1.79
SMAD6O43541 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.85□□□□□ -1.79
SMAD6O43541 AC009977.1-201ENST00000586015 570 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.85□□□□□ -1.79
SMAD6O43541 BNIP3P23-201ENST00000599655 511 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 SNORA62.6-201ENST00000606322 83 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AL590282.1-201ENST00000610379 1136 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AL359697.1-201ENST00000624879 587 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AC026634.1-201ENST00000634369 198 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AP001148.1-201ENST00000624124 2359 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 IPO8P1-201ENST00000455509 3109 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AL157700.1-201ENST00000561973 1432 ntBASIC3.85□□□□□ -1.79
SMAD6O43541 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.85□□□□□ -1.79
SMAD6O43541 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SMAD6O43541 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.85□□□□□ -1.79
SMAD6O43541 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
SMAD6O43541 MTND5P17-201ENST00000418405 1603 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMAD6O43541 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMAD6O43541 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3.84□□□□□ -1.79
SMAD6O43541 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMAD6O43541 SNORA73.2-201ENST00000364946 201 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 SNORA62.3-201ENST00000365110 153 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 AL359837.1-201ENST00000381357 287 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 RNU6-1009P-201ENST00000390996 107 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 AC087650.1-201ENST00000431445 468 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 ATP5HP2-201ENST00000433885 485 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 PGBD4P3-201ENST00000440731 581 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 AL118496.2-201ENST00000448300 230 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 AL590365.1-201ENST00000450788 243 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 NDUFA5P7-201ENST00000452914 242 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 RPL23AP71-201ENST00000470966 469 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AC084198.1-201ENST00000477747 402 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.84□□□□□ -1.79
SMAD6O43541 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMAD6O43541 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 AP001893.2-201ENST00000526949 202 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AC022878.1-201ENST00000530684 149 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.84□□□□□ -1.79
SMAD6O43541 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.84□□□□□ -1.79
SMAD6O43541 HMGB1P33-201ENST00000563485 527 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.84□□□□□ -1.79
SMAD6O43541 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.84□□□□□ -1.79
SMAD6O43541 AC112187.2-201ENST00000604345 283 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AC008277.2-201ENST00000605196 797 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SMAD6O43541 AL020991.1-201ENST00000612314 373 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SMAD6O43541 LINC02471-203ENST00000641941 4752 ntBASIC3.84□□□□□ -1.79
SMAD6O43541 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
SMAD6O43541 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
SMAD6O43541 ZNF285B-201ENST00000561698 1767 ntBASIC3.84□□□□□ -1.8
SMAD6O43541 MFSD8-236ENST00000641509 4050 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMAD6O43541 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SMAD6O43541 Y_RNA.89-201ENST00000363031 102 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RNU6-115P-201ENST00000364310 107 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RNU6-534P-201ENST00000364877 106 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 Y_RNA.295-201ENST00000364918 102 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 XGY1-201ENST00000381172 446 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RNU6-533P-201ENST00000384144 107 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 SNORA51.12-201ENST00000384448 134 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RNU6-809P-201ENST00000384461 107 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 AL138878.1-201ENST00000405131 347 ntBASIC3.83□□□□□ -1.8
SMAD6O43541 RN7SKP285-201ENST00000410137 318 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms