Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 HMGB1P33-201ENST00000563485 527 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 MIR4715-201ENST00000584117 79 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.14□□□□□ -1.75
PHGDHO43175 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.14□□□□□ -1.75
PHGDHO43175 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.14□□□□□ -1.75
PHGDHO43175 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.14□□□□□ -1.75
PHGDHO43175 AC012443.1-201ENST00000605605 231 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC019193.2-201ENST00000610012 634 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
PHGDHO43175 FRG1KP-201ENST00000623592 341 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PHGDHO43175 MAPK10-253ENST00000641010 4072 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PHGDHO43175 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PHGDHO43175 AC092326.2-201ENST00000624772 1561 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 AC009812.4-201ENST00000569134 1805 ntBASIC4.14□□□□□ -1.75
PHGDHO43175 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PHGDHO43175 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
PHGDHO43175 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.13□□□□□ -1.75
PHGDHO43175 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.13□□□□□ -1.75
PHGDHO43175 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.13□□□□□ -1.75
PHGDHO43175 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PHGDHO43175 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PHGDHO43175 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.13□□□□□ -1.75
PHGDHO43175 RNU6-1284P-201ENST00000363701 100 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 RNU6-780P-201ENST00000391030 104 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC110754.1-201ENST00000399740 601 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.13□□□□□ -1.75
PHGDHO43175 MTND1P23-201ENST00000416931 372 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AL807761.1-201ENST00000417622 171 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.13□□□□□ -1.75
PHGDHO43175 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC4.13□□□□□ -1.75
PHGDHO43175 AL139415.2-201ENST00000431968 163 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.13□□□□□ -1.75
PHGDHO43175 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.13□□□□□ -1.75
PHGDHO43175 AC003071.1-201ENST00000451219 789 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.13□□□□□ -1.75
PHGDHO43175 RPL23AP24-201ENST00000458203 385 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 SNORD97-201ENST00000459187 142 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AL121769.1-201ENST00000469473 401 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC109327.1-201ENST00000471666 403 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC010631.1-201ENST00000474150 156 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 RPS27AP1-201ENST00000475545 471 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC109927.2-201ENST00000506416 303 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AL592156.1-201ENST00000508758 304 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.13□□□□□ -1.75
PHGDHO43175 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC4.13□□□□□ -1.75
PHGDHO43175 SNORA31.22-201ENST00000517204 135 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 HMGB1P41-201ENST00000520234 440 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 ERHP1-201ENST00000523006 310 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.13□□□□□ -1.75
PHGDHO43175 SNRPGP16-201ENST00000533275 226 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AP003034.1-201ENST00000534621 422 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC4.13□□□□□ -1.75
PHGDHO43175 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.13□□□□□ -1.75
PHGDHO43175 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.13□□□□□ -1.75
PHGDHO43175 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.13□□□□□ -1.75
PHGDHO43175 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.13□□□□□ -1.75
PHGDHO43175 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.13□□□□□ -1.75
PHGDHO43175 AC006270.2-201ENST00000578523 652 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC4.13□□□□□ -1.75
PHGDHO43175 MIR4801-201ENST00000582704 82 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 RN7SL722P-201ENST00000617780 284 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 RN7SL565P-201ENST00000618246 284 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AC112200.1-201ENST00000625015 234 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.13□□□□□ -1.75
PHGDHO43175 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC4.13□□□□□ -1.75
PHGDHO43175 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PHGDHO43175 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.13□□□□□ -1.75
PHGDHO43175 MARK2P15-201ENST00000432204 2186 ntBASIC4.13□□□□□ -1.75
PHGDHO43175 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
PHGDHO43175 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PHGDHO43175 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.12□□□□□ -1.75
PHGDHO43175 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PHGDHO43175 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.12□□□□□ -1.75
PHGDHO43175 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PHGDHO43175 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
PHGDHO43175 RNA5SP447-201ENST00000363749 119 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 MIR1-2-201ENST00000384961 85 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 MIR607-201ENST00000385241 96 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
PHGDHO43175 RNU2-9P-201ENST00000410194 145 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.12□□□□□ -1.75
PHGDHO43175 OR2AS1P-201ENST00000427827 319 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 RPS29P17-201ENST00000430795 166 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC4.12□□□□□ -1.75
PHGDHO43175 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.12□□□□□ -1.75
PHGDHO43175 CYCSP43-201ENST00000438233 310 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.12□□□□□ -1.75
PHGDHO43175 RPL26P6-201ENST00000440913 438 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 MTCO2P3-201ENST00000442543 421 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 RPS4XP4-201ENST00000443195 763 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 RPL23AP20-201ENST00000447965 421 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 MTND2P24-201ENST00000453434 806 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 RPL23AP31-201ENST00000456160 467 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 AC022364.2-201ENST00000457963 554 ntBASIC4.12□□□□□ -1.75
PHGDHO43175 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.12□□□□□ -1.75
PHGDHO43175 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
PHGDHO43175 NIPA2P2-201ENST00000496376 1083 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 307.3 ms