Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.76□□□□□ -2.13
CACNA1AO00555 AC090751.1-201ENST00000566966 267 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.76□□□□□ -2.13
CACNA1AO00555 MIR5089-201ENST00000580047 84 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 BMS1P7-201ENST00000602440 1052 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 SNRPGP19-201ENST00000603826 189 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.76□□□□□ -2.13
CACNA1AO00555 AC009501.3-201ENST00000605001 1352 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.76□□□□□ -2.13
CACNA1AO00555 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CACNA1AO00555 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
CACNA1AO00555 MIR181B1-201ENST00000385240 110 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 RPS3AP22-201ENST00000488297 769 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 RNU6-405P-201ENST00000516637 110 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 RNU6-467P-201ENST00000517027 110 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CACNA1AO00555 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC1.76□□□□□ -2.13
CACNA1AO00555 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CACNA1AO00555 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
CACNA1AO00555 CYP3A137P-201ENST00000562436 69 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 AL353748.2-201ENST00000622148 471 ntBASIC1.76□□□□□ -2.13
CACNA1AO00555 AC093311.1-201ENST00000506586 2021 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.75□□□□□ -2.13
CACNA1AO00555 RAC1P3-201ENST00000416129 580 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AP002345.1-201ENST00000456493 928 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 AC119751.1-201ENST00000513357 765 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 AP000889.2-201ENST00000532684 490 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.75□□□□□ -2.13
CACNA1AO00555 MAGOH2P-202ENST00000584384 429 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 AC112191.3-201ENST00000604371 277 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC1.75□□□□□ -2.13
CACNA1AO00555 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AC027124.2-201ENST00000428249 105 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 MTCYBP12-201ENST00000440559 1134 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AP000873.1-201ENST00000463987 400 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.75□□□□□ -2.13
CACNA1AO00555 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.75□□□□□ -2.13
CACNA1AO00555 MIR4421-201ENST00000578133 69 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 AL158196.1-201ENST00000616786 434 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.75□□□□□ -2.13
CACNA1AO00555 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC1.75□□□□□ -2.13
CACNA1AO00555 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
CACNA1AO00555 AC010680.1-201ENST00000590024 3590 ntBASIC1.75□□□□□ -2.13
CACNA1AO00555 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.74□□□□□ -2.13
CACNA1AO00555 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.74□□□□□ -2.13
CACNA1AO00555 ARPC3P1-201ENST00000437218 533 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 ARL5AP2-201ENST00000444698 533 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 VN1R96P-201ENST00000446052 858 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.74□□□□□ -2.13
CACNA1AO00555 AC073901.1-201ENST00000462471 408 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 AC083806.3-201ENST00000614016 455 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CACNA1AO00555 AP001486.2-201ENST00000561652 5113 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC1.74□□□□□ -2.13
CACNA1AO00555 RNU1-22P-201ENST00000363334 158 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 RNU1-87P-201ENST00000363727 170 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 SNORA51.4-201ENST00000364993 124 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 RPL23AP48-201ENST00000406913 488 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.74□□□□□ -2.13
CACNA1AO00555 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.74□□□□□ -2.13
CACNA1AO00555 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC1.74□□□□□ -2.13
CACNA1AO00555 AL356575.1-201ENST00000603008 283 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 HPVC1-201ENST00000629899 1198 ntBASIC1.74□□□□□ -2.13
CACNA1AO00555 SNORD21-201ENST00000383953 95 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 AL445687.1-201ENST00000439946 251 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.73□□□□□ -2.13
CACNA1AO00555 AC023050.2-201ENST00000544968 387 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.73□□□□□ -2.13
CACNA1AO00555 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.73□□□□□ -2.13
CACNA1AO00555 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC1.73□□□□□ -2.13
CACNA1AO00555 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.73□□□□□ -2.13
CACNA1AO00555 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.73□□□□□ -2.13
CACNA1AO00555 RNY4P3-201ENST00000365254 95 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 PAICSP7-201ENST00000419829 962 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.73□□□□□ -2.13
CACNA1AO00555 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC1.73□□□□□ -2.13
CACNA1AO00555 AC104229.1-201ENST00000561364 255 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 AC010735.1-201ENST00000567305 1026 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 AC015911.5-201ENST00000587076 451 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 AC110741.2-201ENST00000605278 268 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 CYP3A51P-201ENST00000633513 256 ntBASIC1.73□□□□□ -2.13
CACNA1AO00555 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.73□□□□□ -2.13
CACNA1AO00555 Y_RNA.457-201ENST00000384237 111 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 TATDN1P1-201ENST00000414123 891 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1AO00555 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.72□□□□□ -2.13
CACNA1AO00555 RN7SL274P-201ENST00000492268 272 ntBASIC1.72□□□□□ -2.13
CACNA1AO00555 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.72□□□□□ -2.13
CACNA1AO00555 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CACNA1AO00555 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.72□□□□□ -2.13
CACNA1AO00555 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.72□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms