Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 SNORD65C-201ENST00000390962 71 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AC246680.2-201ENST00000422106 389 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 MTCO2P17-201ENST00000424336 677 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 RPL31P54-201ENST00000429803 370 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 RPS15AP7-201ENST00000439294 405 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AC002542.1-201ENST00000440683 193 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AC234775.1-201ENST00000454247 670 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 SNORA59A-201ENST00000459326 152 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 RNU6-1095P-201ENST00000516148 108 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 SNORA76.2-201ENST00000517095 137 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 EIF4BP1-201ENST00000554881 351 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 U73023.1-201ENST00000603134 700 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 HSPE1P7-201ENST00000604681 321 ntBASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
USH1CQ9Y6N9 AC007336.1-201ENST00000576365 3828 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AL122016.1-201ENST00000403365 367 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AL024474.1-201ENST00000404655 591 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC087499.2-201ENST00000432861 149 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC004866.2-201ENST00000438285 481 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 SNRPGP6-201ENST00000451124 220 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 snoU109.4-201ENST00000458953 143 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC097462.2-201ENST00000504623 481 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 SNORA31.21-201ENST00000517180 77 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AP003467.2-201ENST00000520175 319 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AP000867.2-201ENST00000532468 320 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AP000916.1-201ENST00000533869 835 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC128657.1-201ENST00000549459 145 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC079600.2-201ENST00000550076 130 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC009163.5-201ENST00000575421 637 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC006386.2-201ENST00000624491 75 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC012005.1-201ENST00000624575 75 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC005336.3-201ENST00000623833 2679 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 Z82209.1-201ENST00000422141 2135 ntBASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
USH1CQ9Y6N9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 RNU6-619P-201ENST00000365146 108 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 RNU6-650P-201ENST00000365658 111 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 SUMO1P4-201ENST00000429430 302 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 EZH2P1-201ENST00000431167 291 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC005345.1-201ENST00000431868 217 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC098826.1-201ENST00000433943 471 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 SETP11-201ENST00000473027 690 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC010468.3-201ENST00000508225 458 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC119751.5-201ENST00000514077 770 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 SNORA70.16-201ENST00000516390 95 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC087272.1-201ENST00000523624 533 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AC008739.2-201ENST00000597006 317 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AL022099.1-201ENST00000604551 712 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AL137843.1-201ENST00000605078 385 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 VN1R9P-201ENST00000614184 867 ntBASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.47□□□□□ -2.01
USH1CQ9Y6N9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms