Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 MIR1193-201ENST00000408109 78 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 SNORA3C-201ENST00000408792 125 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 MTND1P21-201ENST00000412991 285 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC019097.1-201ENST00000424783 735 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC011742.1-201ENST00000431448 434 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 MTCYBP1-201ENST00000454315 1119 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 MTCO3P20-201ENST00000454926 688 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC007967.1-201ENST00000455422 1159 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 RPS3AP17-201ENST00000472594 777 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 RPS3AP50-201ENST00000487064 803 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC010587.1-201ENST00000505809 469 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 MTND4LP31-201ENST00000514859 294 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC026801.2-201ENST00000515352 425 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 RNU6-430P-201ENST00000517078 107 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 SNORA31.20-201ENST00000517111 133 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 IGKV2D-19-201ENST00000523346 262 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 MIR3146-201ENST00000580367 79 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 MIR3118-1-201ENST00000581787 76 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 NRBF2P1-201ENST00000587407 859 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AP001029.3-201ENST00000588063 596 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC080078.2-201ENST00000603766 501 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC091167.4-201ENST00000605079 184 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC108747.1-201ENST00000609508 535 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC087241.4-201ENST00000612441 480 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC091953.2-201ENST00000623979 160 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 AC244258.1-201ENST00000637553 1071 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 MTND4P5-201ENST00000435821 1374 ntBASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.72□□□□□ -1.81
CLDN16Q9Y5I7 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.81
CLDN16Q9Y5I7 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.71□□□□□ -1.81
CLDN16Q9Y5I7 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC027514.1-201ENST00000588561 1603 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 MIR19A-201ENST00000384878 82 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AP000567.1-201ENST00000406413 156 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 MTHFD2P2-201ENST00000407725 247 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 Y_RNA.619-201ENST00000410951 90 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 RN7SKP263-201ENST00000411194 309 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 RNA5SP39-201ENST00000411245 120 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 SSXP9-201ENST00000417503 292 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC099677.1-201ENST00000420575 175 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 USP9YP36-201ENST00000424581 829 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC009961.2-201ENST00000435771 251 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 RPL35AP22-201ENST00000436855 335 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC108059.3-201ENST00000456388 214 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AL672167.3-201ENST00000465951 960 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC004062.1-201ENST00000509926 645 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 RNA5SP179-201ENST00000517284 121 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC107934.1-201ENST00000522215 217 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC018630.1-201ENST00000541376 925 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 OR4T1P-201ENST00000554933 911 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC087481.2-201ENST00000565492 330 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC053481.4-201ENST00000583164 216 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 KC877982.1-201ENST00000602313 470 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AL161729.4-201ENST00000604650 476 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC091304.9-201ENST00000612091 226 ntBASIC3.71□□□□□ -1.82
CLDN16Q9Y5I7 AC024941.1-201ENST00000612250 334 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms