Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC025678.1-201ENST00000567861 338 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 MTCO3P24-201ENST00000572729 782 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 OR4K8P-201ENST00000578842 1048 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC090616.5-202ENST00000582111 297 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC012417.1-201ENST00000582307 1039 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC105224.1-201ENST00000587055 421 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL161729.3-201ENST00000603533 673 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL136363.1-201ENST00000605349 337 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AP002360.4-201ENST00000606980 481 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL603758.1-201ENST00000618654 241 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AC139792.3-201ENST00000623525 224 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 AL645937.1-201ENST00000641739 1652 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 PNPT1P2-201ENST00000456768 2050 ntBASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.31□□□□□ -1.72
PCDHA3Q9Y5H8 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-1120P-201ENST00000362988 108 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 Y_RNA.88-201ENST00000363029 99 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 U3.11-201ENST00000364476 212 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-432P-201ENST00000384196 109 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 Y_RNA.573-201ENST00000384763 105 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 MIR124-3-201ENST00000384866 87 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 Y_RNA.604-201ENST00000410574 102 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 ELOCP19-201ENST00000411919 318 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC022028.1-201ENST00000412054 408 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 RWDD4P2-201ENST00000426392 563 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC006011.1-201ENST00000442758 349 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC079781.2-201ENST00000446424 169 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC234775.1-201ENST00000454247 670 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC007967.1-201ENST00000455422 1159 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC022364.2-201ENST00000457963 554 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 SNORD108-201ENST00000459332 71 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 RPS3AP50-201ENST00000487064 803 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC093278.1-201ENST00000494700 600 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 RNU6-1220P-201ENST00000517126 108 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 DEFB108D-201ENST00000527787 222 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC109635.3-201ENST00000529536 185 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AL512360.1-201ENST00000555346 234 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC022655.2-201ENST00000577280 318 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 HMGB1P50-201ENST00000605814 607 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC128687.2-201ENST00000609657 566 ntBASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.3□□□□□ -1.72
PCDHA3Q9Y5H8 CR848007.1-201ENST00000442354 1699 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 RNA5SP447-201ENST00000363749 119 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 MIR135A2-201ENST00000384854 100 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 MIR141-201ENST00000384975 95 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 RPS4XP8-201ENST00000402039 771 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AL078595.1-201ENST00000404458 226 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AL353193.1-201ENST00000421444 268 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AL358472.1-201ENST00000431295 329 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AL353572.1-201ENST00000442490 417 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC016696.1-201ENST00000446949 318 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 WASF1P1-201ENST00000447560 1131 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC009220.1-201ENST00000451614 275 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 AC092989.1-201ENST00000481235 277 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 RN7SL271P-201ENST00000487601 295 ntBASIC4.29□□□□□ -1.72
PCDHA3Q9Y5H8 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms