Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 NEK4P1-201ENST00000433383 879 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 OR6K5P-201ENST00000447050 945 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 RPS4XP22-201ENST00000480755 780 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 COX6CP8-201ENST00000522620 226 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 DEFB108D-201ENST00000527787 222 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC006539.2-201ENST00000601729 572 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AL139418.1-201ENST00000613613 177 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC079395.3-201ENST00000615161 484 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC008993.2-201ENST00000631744 806 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AC009812.4-201ENST00000569134 1805 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 AF117829.1-206ENST00000621883 3802 ntBASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ATG4BQ9Y4P1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 CUL1P1-201ENST00000509510 2425 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 RNU6-289P-201ENST00000364093 107 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 RNU4-28P-201ENST00000364739 141 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 RPS3AP26-201ENST00000398259 784 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 MTCO2P21-201ENST00000419780 677 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 UBE2D3P2-201ENST00000424409 445 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC005300.1-201ENST00000428401 373 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 EEF1E1P1-201ENST00000446998 430 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC002381.1-201ENST00000447049 280 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 HMGN1P18-201ENST00000457642 277 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 MTCYBP43-201ENST00000513621 740 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 RN7SKP287-201ENST00000516546 266 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC023050.2-201ENST00000544968 387 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 OR6C7P-201ENST00000547875 934 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 TRAV37-201ENST00000553906 342 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AL354943.1-201ENST00000572103 781 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 MTATP6P24-201ENST00000576835 677 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 MIR3921-201ENST00000577308 85 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC013444.2-201ENST00000603317 787 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC093424.1-201ENST00000604999 338 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC112220.3-201ENST00000605502 502 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC087683.2-201ENST00000611384 326 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AL136981.2-201ENST00000617319 734 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC002550.2-201ENST00000621246 394 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 MIR4275-201ENST00000636486 87 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC011477.1-204ENST00000623416 1325 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 AC073346.2-201ENST00000624724 2058 ntBASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ATG4BQ9Y4P1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AC093010.3-201ENST00000570269 15214 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 SRP72P2-201ENST00000344851 1979 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 RNU1-75P-201ENST00000347264 129 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 RNU6-343P-201ENST00000364709 104 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 MIR1290-201ENST00000408735 78 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 RNA5SP120-201ENST00000410900 112 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 CST9LP2-201ENST00000437612 320 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 RPL23AP35-201ENST00000451906 501 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 MTND1P9-201ENST00000453775 944 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 SNORD121B-201ENST00000458838 81 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 snoU13.8-201ENST00000458890 104 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 VN1R104P-201ENST00000505115 1009 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 MRPS36P3-201ENST00000519284 130 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AC023538.1-201ENST00000534576 736 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AL163153.1-201ENST00000554223 283 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 RPL21P12-201ENST00000559810 515 ntBASIC3.09□□□□□ -1.91
ATG4BQ9Y4P1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms