Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 TAF9P2-201ENST00000454958 515 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC108059.3-201ENST00000456388 214 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 RPL23AP62-201ENST00000463396 453 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 HSPE1P6-201ENST00000479457 291 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 TRBV12-2-201ENST00000489763 344 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC022878.1-201ENST00000530684 149 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AP005136.1-201ENST00000579765 429 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC007038.2-201ENST00000608095 740 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC103710.3-201ENST00000608157 948 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC024941.1-201ENST00000612250 334 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC009159.1-201ENST00000618386 642 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC009878.1-201ENST00000621819 340 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 MIR6500-201ENST00000622700 86 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 AC244205.2-202ENST00000635781 342 ntBASIC3.67□□□□□ -1.82
BRF2Q9HAW0 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
BRF2Q9HAW0 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 Y_RNA.51-201ENST00000362725 102 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 RNU1-18P-201ENST00000363062 164 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 RNU5A-8P-201ENST00000364102 114 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 RNU1-13P-201ENST00000384499 162 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 SNORA40.3-201ENST00000390964 122 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 SNORD115.1-201ENST00000391109 76 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 MRPL42P2-201ENST00000403169 426 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 RPL7P25-201ENST00000404151 721 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC078974.1-201ENST00000411597 223 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 HMGN1P14-201ENST00000412459 517 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 BTF3L4P1-201ENST00000413813 468 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 SPA17P1-201ENST00000416656 452 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 USP9YP13-201ENST00000417797 480 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AL159169.1-201ENST00000421119 127 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AL353777.1-201ENST00000425552 326 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC010153.1-201ENST00000432862 727 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 MTND1P28-201ENST00000435623 950 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 Z74696.2-201ENST00000436514 498 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 FTH1P1-201ENST00000437933 532 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC006480.1-201ENST00000449887 378 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 MTND1P27-201ENST00000451117 902 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 snoU109.1-201ENST00000459339 135 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC078785.3-201ENST00000476607 425 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC055855.1-201ENST00000489563 579 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 FTH1P21-201ENST00000512179 511 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 PAICSP4-201ENST00000517543 1253 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC022616.6-201ENST00000520479 119 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 FAM60DP-201ENST00000524174 632 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AP000857.1-201ENST00000532151 543 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC007115.1-201ENST00000546853 234 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AL157394.1-201ENST00000562983 1224 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC006362.1-201ENST00000567392 174 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AL356432.3-201ENST00000568952 465 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC120057.2-201ENST00000571520 271 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 SEPT7P9-203ENST00000604116 343 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 BRDTP1-201ENST00000605735 677 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC245008.1-201ENST00000608123 476 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC103710.1-201ENST00000610003 901 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 BX323046.1-201ENST00000610145 535 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AL390240.1-201ENST00000612950 384 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC104010.1-201ENST00000616889 150 ntBASIC3.66□□□□□ -1.82
BRF2Q9HAW0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 166.5 ms