Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 DEFB108F-201ENST00000344638 222 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 RNA5SP50-201ENST00000363731 107 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 RNU6-906P-201ENST00000384700 70 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 MIR7-3-201ENST00000384898 110 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 SNORD67-201ENST00000390833 111 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 RPS4XP3-201ENST00000398541 413 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 FAT1P1-201ENST00000406588 507 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 CCDC58P2-201ENST00000417131 366 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC106883.1-201ENST00000418805 562 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 NDUFB4P6-201ENST00000436819 366 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 MTND5P14-201ENST00000441481 1267 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 snoU13.8-201ENST00000458890 104 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC103783.1-201ENST00000520506 373 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 DEFB108D-201ENST00000527787 222 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC083760.1-201ENST00000589621 670 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC012119.1-201ENST00000603184 222 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC004987.4-201ENST00000603383 338 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC245297.2-201ENST00000610119 565 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AL450472.3-201ENST00000615578 367 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 MIR6076-201ENST00000617521 113 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC002550.2-201ENST00000621246 394 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AL049781.1-201ENST00000623195 3585 ntBASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.18□□□□□ -1.9
DDX47Q9H0S4 MTND5P7-201ENST00000413558 1798 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 RNU6-636P-201ENST00000384598 107 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 MIR181B1-201ENST00000385240 110 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 RNA5SP171-201ENST00000391071 115 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AL357075.1-201ENST00000404107 726 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 RPL27AP8-201ENST00000424277 446 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 RPS25P9-201ENST00000435591 252 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AL358232.1-201ENST00000448030 501 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC234775.1-201ENST00000454247 670 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC006483.1-201ENST00000487308 313 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC108729.1-201ENST00000487812 947 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 SNORA31.1-201ENST00000515993 133 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 SNORA31.5-201ENST00000516190 133 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 SNORD59.2-201ENST00000516873 68 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 RNU6-714P-201ENST00000516963 103 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC009712.1-201ENST00000564938 316 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 BNIP3P33-201ENST00000598912 569 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AP001429.1-201ENST00000602568 530 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC006270.3-201ENST00000605967 1036 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AP000254.1-201ENST00000609934 520 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC069234.5-201ENST00000611056 416 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC019176.2-201ENST00000611579 315 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC106754.1-201ENST00000562632 1513 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 AC110774.1-201ENST00000623567 2018 ntBASIC3.17□□□□□ -1.9
DDX47Q9H0S4 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
DDX47Q9H0S4 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
DDX47Q9H0S4 AC011460.1-201ENST00000636268 1834 ntBASIC3.16□□□□□ -1.9
DDX47Q9H0S4 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX47Q9H0S4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX47Q9H0S4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX47Q9H0S4 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DDX47Q9H0S4 SNORA71.3-201ENST00000362582 128 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms