Protein–RNA interactions for Protein: Q96A33

CCDC47, Coiled-coil domain-containing protein 47, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47Q96A33 RPL23AP57-201ENST00000332361 466 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 SNORD21-201ENST00000383953 95 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 Y_RNA.408-201ENST00000383987 102 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 RNU6-1122P-201ENST00000384449 107 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 RNU6-1257P-201ENST00000384625 110 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 AC005326.1-201ENST00000429197 123 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 GTF2IP3-201ENST00000433887 494 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 SDCBPP1-201ENST00000440192 890 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 Z75741.1-201ENST00000446793 314 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 AC234775.1-201ENST00000454247 670 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 AC091153.1-201ENST00000466297 402 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 RN7SL20P-201ENST00000488827 297 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 RPL7P23-201ENST00000493874 747 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 MTCYBP17-201ENST00000503579 789 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 AC103783.1-201ENST00000520506 373 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 HSPE1P20-201ENST00000538133 289 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 UBL5P2-201ENST00000583788 219 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 AL390208.1-201ENST00000605885 644 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 AL596245.1-201ENST00000618994 362 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 ZNF519P1-201ENST00000449011 1626 ntBASIC3.4□□□□□ -1.87
CCDC47Q96A33 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC47Q96A33 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC47Q96A33 AL353743.1-202ENST00000431724 1695 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 SNORD67-201ENST00000390833 111 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 AL031679.1-201ENST00000400616 525 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 MIR1290-201ENST00000408735 78 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC068533.2-201ENST00000411872 306 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 CCDC58P2-201ENST00000417131 366 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 Z75741.2-201ENST00000417272 1167 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 RPL21P2-201ENST00000440049 481 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC147055.4-201ENST00000504399 745 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC002456.2-201ENST00000509356 380 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC093677.1-201ENST00000514414 678 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 RNU6-583P-201ENST00000516012 92 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 RNU6-798P-201ENST00000516912 103 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC090615.1-201ENST00000577519 154 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC006116.7-201ENST00000590141 756 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 VN1R78P-201ENST00000597393 564 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC010620.2-201ENST00000600135 313 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC100793.4-201ENST00000613683 429 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AL450472.3-201ENST00000615578 367 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC006213.4-201ENST00000616184 634 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC084757.4-201ENST00000616350 526 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AL158163.2-201ENST00000619110 700 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC012314.7-201ENST00000619693 93 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 AC084035.1-201ENST00000634543 607 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 TPTE2P4-201ENST00000258589 1605 ntBASIC3.39□□□□□ -1.87
CCDC47Q96A33 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC009487.2-201ENST00000420969 6821 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 RNU6-28P-201ENST00000362378 107 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 RNU5A-1-201ENST00000362698 116 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 RNU4-51P-201ENST00000364206 140 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 RNA5SP267-201ENST00000364893 126 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 SNORA40.2-201ENST00000390847 128 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 SNORA26.7-201ENST00000391288 122 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 MIR887-201ENST00000401258 79 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 FO393413.1-201ENST00000402892 195 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AL158156.1-201ENST00000422509 473 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 MTCO2P5-201ENST00000422621 426 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AL139421.1-201ENST00000423010 169 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC005300.1-201ENST00000428401 373 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 AL591503.2-201ENST00000442314 1005 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 PRELID3BP6-201ENST00000503839 571 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC098799.1-201ENST00000504752 800 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 HSPD1P15-201ENST00000505573 1122 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC47Q96A33 AC007536.1-201ENST00000533382 349 ntBASIC3.38□□□□□ -1.87
CCDC47Q96A33 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms